Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_028074.2
- Aligned Length:
- 2871
- Identities:
- 172
- Gaps:
- 2674
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGATCGGTAGATTGAGTGGCTAGAGAGGTCGGAGGTAAGTGGCTATAGAAGTCGGGCGGACCCGGAACCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGACGCGACACCATGACTTATGCTTATCTCTTCAAGTATATCATCATCGGAGACACAGGTGTGGGGAAGTCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTCCTCCTGCAGTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCTCACAATAGGTGTGGAGTTTGGAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTATGGTCAACATTGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGGGAGCAGCTGGAGCACTGCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCATGGTTAGAGGATGCCCGGCAGCACTCTAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAACATGGTTATCATGCTCATTGGGAATAAGAGTGACCTAGAGTCCCGCAGGGATGTGAAGAGAGAAGAAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAGGCCTTTGCTAGGGAGCATGGACTTATATTCATGGAAACTTCAGCCAAAACAGCCTGCAATGTTGAAGAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATAGGGTCCAACTCTGGCTGCTGCTGAACATCTGGCTTGAACTTTTTTTGTCCTTCCTGGAATAGCTTCAGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAATAGGCTTAATGAAAGAGGTCTTTCTTGCTTTGGCTGAGAGCAGCCTCTTTTTAAAGTGTGATGTTTTGCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCCACCTAAAGACCAGGAGAGAATTTGGGCCCTTACTGACCTGTCCTCCTTCAGGGACATGAGCATTCCCTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGATTAGGGTTCTTCTTATCCTCCTATACAAATTTCTTAAATTGTTAGGATCAAAGTTGATTATCACAGTAGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAAAATAATTTCATGGCGGGGCGCCATGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGTGGGCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCACCTGAGGTCAAGAGTTCGAGACCAGCCTGACCAACTTGGAGAAATGCCATCTCAACTGAAAATACAAAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGCTGGGTGTGGTGGTGCATGCCTGTAATCCCAGGTACTCGGGAGGCCAAGGCAGGAGAATCGCTTGAACCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGGTGAAGGTTACGCTAAGCCAAGATCACGCCATTGCACTGCAGCCTGGGCAACAAGAGCAAAACTCTGTCT 1258
Query 1 ---------------------------------------------------ATGGAGTCTCACTCTGTCACCCA 23
|||||||||||||||||| .|||
Sbjct 1259 CAAATAAATAAATAATTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGGGGGGATGGAGTCTCACTCTGTC-TCCA 1331
Query 24 GGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCA 97
|||||||||||||||||.|||||||||||||||||||||||..|.|.|..||||||||||.||||||..|||||
Sbjct 1332 GGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCACTTTCCAGGTTCAAGCAGTTCTCCTGCCTCA 1405
Query 98 GCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGA 171
.||||||.|||||||||||.|||||.|.||||||||||.||||||.|.|||||||.|||||||||.||||..|.
Sbjct 1406 ACCTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACACCTGGCTCATTTTTGTATTTTTAGTAGAGACAGG 1479
Query 172 GTTTCACCATGTTGGCCAGGTTGGTCT----------------------------------------------- 198
||||||||||||||||||||.||||||
Sbjct 1480 GTTTCACCATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGTGATCCGCCCACCTTGGCCTCCCAAAGTGCT 1553
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1554 GGATTACAGGTGTGAGCCACCGTGCCTGGCCTAAATAAATAATTTCGTAAGCATATACAATCCACTTCCCACTA 1627
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1628 AGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATC 1701
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1702 CTCTGCCTCGGAATTTCATTGAGTTTTTTTCTTCCTTGCCTTTGGGTGTCTGCTTGCCACTTCCTAAGAATTCT 1775
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1776 TGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACTATCCTATTATTAGCTTCTATCT 1849
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1850 CTTAGTGTAACTTCAAAACTTTTAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCACTTATTATTACCTAAAG 1923
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1924 AAAACATTTGTTCCCTGTTCATTTTATTTTAGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTT 1997
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1998 CTACTGTTTCATCAAACTCCCTTCTTAACTAGACCTAGACTTTCTACTCCAATCAGGCTAATCTACTTACTGAA 2071
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2072 TGTGACATATTTATTCCTAGTTCCATACCTTTGCACATGCCCTACTCTCCACTAATTATACTTAAAAGTCCAAA 2145
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2146 AATTTTTTCTTTAGTAACAGACTTAGGTACTGCTAAGCAGTTATTAACACAATATTCCTTAGTTTTCATATGTT 2219
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2220 GGTTATTCATATGTCTATTTATATGTATATTTATTTTTATGTATGTTACTATGTAAATATGGTTTGCAGTTGTT 2293
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2294 TTTGTGTGGAATCTTGTCTTTCCGTATAAGTTGTAAGCTCCTTGAGAGCAGGATCCATGTCATTCCTTTATTTT 2367
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2368 TATAAATTATTCCCCCTATCATTCCTTTACAGTGCCTAGTGCTACTCATTATGTGTTCATTGAATTTGACTGAC 2441
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2442 ATAGTTAAAAACTTAAGGTTTATTTTAGACTTTCAAGGAAACAAAAGACTTTAGAGTCCTCTCTCTGTAATTCT 2515
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2516 GCCCCACTCATTTGTTTACCCTGGGTTTTATACAGTTCTCTTCCTTCTCCCCTCCCACCTTTCCCTGGCTTTTT 2589
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2590 GCCTCCATTCCATGAGGCATACAGTAAGGCTGCCTGCTAGTAAGCAGTCACATAAGTGGGTACCTATCCAGCCA 2663
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2664 TTCTCTTTTCAGAGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCCTTCTGGGT 2737
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2738 TGGTTGCTATATATATCTTTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCTA 2811
Query 199 ----------------------------------------------------------- 198
Sbjct 2812 CTTTCTTTTTGCTGTTGATGAATTGTTTCATTATTAAATATATGCATGTATCAAAGCTA 2870
