Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_036595.1
- Aligned Length:
- 2674
- Identities:
- 171
- Gaps:
- 2479
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGACAAAAAGTCTGCCCTGTAACGGTACTTCTTGCTCAGTGACAGCAGCAACCCACCTCCTTATCCCTTTCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTTATAAACCCGTCCTTTAAACCACTATTTGGGAGGTCGGGCCATCAGTTTCGGCGTTTTTTCCAGAGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGCTCACAGCGATATCGCGAGAGACGGGAATTGCTCTGTCACGCAAGCTGGAGTGCAGTGGTGCCATCTCGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACTGTGACCTCTGCCTCCTGGGCTCAAGCCATCCTCCCACCTCAGCCCTTCAAGTAGCTGGGATTACAGGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCATCCTCTCACTCGCCTCTGACTTTTCGCACAGGAGAGAGCTGGTCGAATAGTACAATTCCCCGATGTGAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGGAGAAGCTGGGGAAAGGAAGAATGATCTTCAGGCAGTAAGGGCCCCTACTCCAGTATGATTGGTGTCCTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAAAAAGGAGAAATTGGACACAGACACCCTACCAAGAAGAACACTATGTGAAGATGAAGGCAGAGATCAGGGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGCCTCTACTTGCTGAGAAACTCCTACAGTTGCCAGCCCACCACTAGAAGCAAAGGAAGAAGCACAGCCCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAGGAACCAACCCTGCTAATGCCTTGGTCTTGGACTTGCAGCCTCCAGAACAGCGAGCCAATACATTCCTGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTTAAGCCACTGACTGTGGCACTTTATTACAGCAGCACTAGGAAACTCATACAGGAGGTGACAGTGCTCAGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAAACAGGACCTTCCACTTCCATGGCAAAGCCCTCATCTTTCGTGCCCATGCGCCATTTGATCTGCACACAAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACTGAGCAGGTTCCTCAGCTATTATTATCCCCACCTTTCAGATGGAAAGAACTGAAGCTCAAGAGGGCCAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAATTTGGCTATGGCTTTCTTTATTTTCTTTTTCATGGGCAGAAGTAGATTTCAGTTTTGGTCCCTTTCCACTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCATATCAGGTTGCCTTAAGGCAACTTTGAAAAGTCTAAAATATTAAACAGTTTGTGAAGTTATTATCATTATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATAAAGGACAGCGCGAGGTTAGTCTTACCCTAGAGAGCCCCATTGTTGGCCCAAAGCATCTTGCCAGGAGCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATAGGACCATGTTTTCAAGGCCCCCAAAGAGCACAGGGCTATTGGTCCATCCCAGCTCCTGGAATGGCTCATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTACCCACCCTGCCTCCAGCTGAGGAGCCAGGGAGAAGCACTGACCCCTGATCTTGCTATCCCTTCCATTACAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTGCCAGAGGAGCTTTTTTCAGGGGTGGCCGCTTCCCTCTCCTCAAGAGAATTCTGGGGACCAACCAGCTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCCTGCTGTTGGCCTCAGGGTCACATCTCACCCAGACACCCCCACCATTCCCTCAGGTCTAGGGATGCTGCTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCTACCATGGGATCTTCTTTTTATTTTTATTTATTTATATTTTCCTTATGCCTAGTGTAAAGGGATTTCTTTT 1480
Query 1 ---------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGG-----AGTGCAGTGGCGT 42
|||||||||..|||||||||||||||||| ||||||||||||.
Sbjct 1481 CTTTTTTGTTTTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGCAGTGGCGC 1554
Query 43 GATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGA 116
.||||.||||||||||||||||..|||||||||||||||..|||||||..|||||||||||| ||.||||||||
Sbjct 1555 TATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCC-AGGAGCTGGGA 1627
Query 117 TTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAG 190
|||||| |||||||||||.|..|||.||||||||..|.|||||||.||||.||.|||||||||||||||||||
Sbjct 1628 TTACAG--GTGTGCCACCACATTTGGCTAATTTTTTTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAG 1699
Query 191 GTTGGTCT------------------------------------------------------------------ 198
|.|.||||
Sbjct 1700 GCTAGTCTCGATCTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAGAATGCTGGGATTACAGGCATGAG 1773
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1774 CCACCGCTCCCAGCCAGGATCTTCTTTTTAAAGCTATCACCACCCACTCTCATTCCCCAGGACTCTCCTCACCC 1847
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1848 CTCCGGCTGCAAAGGCAGCTGGTGTCCCTACTGGCTCCTTCCTTTCTGCCCCTAAAGACAGGCACACAGGTGAT 1921
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1922 TTTCCTTTTAAGTGTTTTTCTGTGGATTACTGCGGGGAAATTGACAGGGGCTACAGGGGCTGATAAAAGGAATA 1995
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1996 ATCTTTGATATTCTTTCAGTTGGGTCGCTGATTTTCTTGCTGGGCTGACAAGAGCAATCTTCCCTACTTGGAAT 2069
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2070 CTTGGTTTTATTCCTTAGCATGGGCCTTATCAAACCTACTTTTTAATGAAGGGAGAATGAAGAAGCCATTGAAG 2143
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2144 CAGACCTCTAGCTGCCAGTCAGGTCTGCTCTGAAGGCTGCCTATCTGCGGGGACATGTGACTTCTGGGGCTTTC 2217
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2218 CAGATTAAGTAATGCTCACCCCACATGTCTGAAATTCTCCAAACACTATTCCGGCCCTGCTGTGATTCTTAGAG 2291
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2292 CAGAGGTTCTTTGCCTTTTTAGTGTAATGGATCCCTCAGCAACTTGGTGAGCCCTTCTCAGAATAAAGTTTCTA 2365
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2366 ATGCAGAAAGTAAAACACATGGGATAATAAGGGAAGTCATGTCCTTTGAAATCCTTATCAAAAATATTTTTCAA 2439
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2440 ATTTTGTGATATAATAAGTTTGGTTGCTATTATATAGCATAATATAACTTCATATCTAATAGCTATTGTTATTT 2513
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2514 TGAAGTAGTGGTGAATATATATGCTATTTTGAGATGTCTAAAACAACTGTAATGTGTTACAAAAATATCCATGA 2587
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2588 TTTCTATCGGTGACAAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2661
Query 199 ---------- 198
Sbjct 2662 AAAAAAAAAA 2671
