Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_038888.1
- Aligned Length:
- 3110
- Identities:
- 171
- Gaps:
- 2914
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATTGCTCCAGATCCTAGAAAATAAAAGCAGGAAAGGAAAGGTTGGCTGAACAGGGAAGGAAAATATGTCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAAAAGACAAATGATTATCTCAGGAAAAGTTCCTGCCCCTCTAAACTCTGTGCTGGGCAGCCACACGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGAAAGTGCTGTGTCCTTGGAGTGCCCTGCACGCTGCAACTGAAGCCAACAAGACACGGCCCAGACAGGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGGTTCTGCTAACAGTGGGGAGGGGACATCTGGCAGCATCTCTCCCAAGCAGCAACGGTAGCAGTGGTGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAACAGCAGCAGCAGCTGGGGAGTGTCCCTCCAACTTCAGAGTGAGCAGCAGCAGCTGACCAGATTGGAGGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTCCACTGTCTTCCCTGGCAGCTGTGATGTGTTGTGCGGTGGCAGCTGAGGATTGCCTGCGTGTAATCTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGTTCCAAGATGCTTGTTGGAAGTGGAGCCTGGTCAAGCAGCAGAAAGGACAGCTGGATCCATGCTGGGTGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGAGGTGGGGTGCTTGTCAGGGAAGTTGGCTTCAGCTGGAACTGGAGGTTGGCTCCAGCAAAGGAGGTTGAAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCACTGATTCCTGACCTGCAGCACCCAAATGGCCACAAAGAGATGTCATGGGTTTTGAGGAGGCCACAGAGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACAGCTTTAGTGTCTTCAGAAGGATGAAGAAAACTTGAACAACATTTTAAAATAGCTTGAGATATAATTCACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCAGAGAGTGCATCCATCTAAAGGGTACAATTCAATGGATTTTAGTATATTTACGGAGCTGTGCATTCATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTACAATTAATTATAGAACTTCTTCATTTACTCAAAATACCCCAGCACCCCTTAGCTATCACCCTGATTCCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCTCCCCCAGCCCTAGGCAACCATTAATCTTTTTTGTATCCATAGATTTGTCTATCCTAGACATTTCATATAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGGAATCATGCAATATACGACCCTTCTTTCACTTTGTGTAATGCTGTCAAGGTACATCCACGTGATATCAGTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCATTCTTTTTATGGCCAAATCACATTCCATTGTATGGATATATTACATTTTATTTATCTGTTCATCAGTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGGACATTTGGGTTGGTTTCCATGTTTTTGGCTGTTAGGAATGATGTCCCCATGAACATTCATGTACAAGTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGTGTGGACATGTGTTTTCATTTCTCTTGGACATATGCCTAGGAGTGGAATTGAGTCACATGGTAACTTTATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCATTTGAGGAACTTCCAGACTGTTTTTCAAAGTGGCTACACCATTGTACATCCCCACCAGCAATGTACAAGG 1332
Query 1 -----------------------------------------------------------ATGGAGTCTCACTCT 15
|..||||||||||||
Sbjct 1333 GTTCCAGTTTCTCCACATTTTTTTCAACTTTTTTTTTAATCATTTGACTTTTTTTTGAGACAGAGTCTCACTCT 1406
Query 16 GTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTC 89
||| .|||||||||||||||||||||||||||..|||||||||||||||.|||||||||||||||||.||||||
Sbjct 1407 GTC-GCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTC 1479
Query 90 CCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCAT-ACCTGGGTAATTTTTGCATTTTTAGT 162
|..|||||||||||||||||||||.||.|.|||...|.||||||||| ||| .|.||||.||||.|||||||||
Sbjct 1480 CTGCCTCAGCCTCCCAAGTAGCTGAGACTCCAGGTATATGCCACCATGACC-AGCTAATGTTTGTATTTTTAGT 1552
Query 163 GGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------------------------------- 198
.||||.||.|||||||||||||||.||||.||||||
Sbjct 1553 AGAGACGGGGTTTCACCATGTTGGTCAGGATGGTCTTGATCTCTTGACCTCATGATCCACCTGCCTCAGCCTCC 1626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1627 CAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTCATCTGACTTTTTAATTAAAGCTACCCTAGCA 1700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1701 GACATGAAGTGATATCTCATTATGGTTTTGATTTGTATTTCTCCCATGGCTAATAATATTCAGGACCTCTTTAT 1774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1775 GTGCTTATTGGCCATTTGTATATCTTTTTTAAAGAAATATCTATTCAGATCCTTTGCTTATTTTTGAATTGGGC 1848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1849 TATTTGTCTTTTTATTCTTGAGTTGTAATTGTTCTTTATATATTCTAGATACAAGCAACTTATTATGTTTATAG 1922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1923 TTTGCAAACAATTTTTTCCCATTCTTTGGGTTGTCTTTTCACTGTTTTGATAGTGTCTTTTGAAGCCCCAAAGT 1996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1997 TTTTTATTCTGATGGCTGGTTTATCTGTTTTTTTCTTTAGTTGCTCATGCTTTTGGTGTCAATCTAAGAATGCA 2070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2071 GTGCCAAATCCAGGGTCATAAGGATTTATCACTATGTTTTCTTCTGTGACTTTTATGATTTTAGTTCTTCTTTA 2144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2145 TAGGTCATTGATCCATTTTGAGTTAGTTTTTTTATACAGTGTGAAATATGGATCCAACTTCATTCTTTTGCATG 2218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2219 TGGAAATTCAGGTGTCCCCACATCATTTGCTGAGGGGACTATTCTTTTTCCATTGAAAGAAGTTGGCACTCTTG 2292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2293 CTCAAAATCAACTGGCCATAGATATGTGGGTTAATTTCTGGGCTCTCAGTTCCATTCTGTTGATGTATAGATCT 2366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2367 GTCCTTATGCCCATACCACACTGTTTTGATTACTGTCATTTTATAGCAGGTTTTAAAATTGGGTAGCATAAATT 2440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2441 ATCCAACTTTTTCAAGATTTCTTTAGCTATTTGTGTTTTCTTGCATTTTCATATGCATTTTAAAAGCAACTTGT 2514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2515 CCATTGCTGAAGTCGAAATTTTGATAGGGATTGCATTGAATTTGGAATCTGGGAGTATTGCTATCTTAATAATG 2588
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2589 TTAAGTTTTTCAATCTATAAACATGGGATGTCTTTCCACTCATTTAGATCTTCTTTAGTTTTCAACAATATTTT 2662
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2663 GTAGTTTTCAGAGCATAAGTTTTGTACTTCTTTTGTTAAATATGTTCATAAGTATCTTTCTGATGCTAATATAA 2736
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2737 ATGAGTTTTTTTTTAAGACAAAGTTTTGCTCTGTCACCAAGGCTGGAGTGCAGCGGTGTGATCTCAGCTCATTG 2810
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2811 CAACCTCTGCCTAACGGGTTCAAGTGATTCCCCTGCCTCAGTCTACTGCGTAGCTGGGATTACAGGTGCCCACG 2884
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2885 ACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACAAGGTTTCACCATATCGGCCAGGCTGGTCTTGAACT 2958
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2959 CCTGACCTCAAGTGGTCCACCTGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCTTGAACCACTGTACCCAGA 3032
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3033 CTGGAATTGTTTTCTTAACTTCATTTTTTATTTGCTCATAACTACTGTATAGAAATAAACTGATTTTTGTACAC 3106
Query 199 -- 198
Sbjct 3107 TG 3108
