Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_072999.2
- Aligned Length:
- 4349
- Identities:
- 173
- Gaps:
- 4153
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAAGAAGTTTTGAGCCAACGAGGGGAAGAAAGGAGTTGGGGCAAAACAGGAGGCGTTTCCCTACCCGCATAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCCCCGTCCCCGAGACACCCAATCCCCCCACCCCCAGCCTGCCCGCGCCTCCCGCCCCCAGCTCCTCGCCCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGACAGCTGGCAGCCCCGCGCGGACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCCGGGGCTTTCCCGGGCGCTGCTCTCCTCCTGCTGCCCCCTCGCTAGGACCCGGCGGACGCCTCGTCTGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCACGCCCTCTAGCCCCTACCCCCACACCCCCAAAACAGAACAGACCCCCATCCCTGGGCTGGAGGACCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTTGGCAGCCAGCTGAGAAGGCGCCCCGGGGAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCTCCTCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCCCCTCCCGACTCTCTGCTCCTTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTCCTGCGCTCCTGCCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGCCTCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCTGCTGCTGCTGCGCTACCTGGTGGTCGCCCTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAACAAGTAGTCACAGCAGTAGAGTACCAAGAGGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGATTAGAGTGGAAGAAACTGGGTCGGAGTGTCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAATCGAGCTGAGATGATAGATTTCAATATCCGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCAGCAGTTCCATCATGTGAAGTACCCTCTTCTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGAAGGGAATCCAGCTCCTGAATACACATGGTTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGACACTGGAGAATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGATCTCAACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGCTATGCTCAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCCAGAAGAGTAATTCTTCATCTAAAGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATTTAAAGACTCCACTTTAGAGATACACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAGCCACCGTTGTTACACAAGTTATTAAACTATTATAAAACTCTGCTTTGTCCGACATTTGCAAAGAGGTACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGGAAATGGAATTGGTATTTCATTTTAATTTTCATGACTACTAACTCACCTGAACTTGCTATTTTAAACAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAGTTCTGTCGACACCTAAAATATAATCTGGCTTCTTGTGTCTGGACTAAGTTAAAAGAATTAAAATACTTTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATGTCCTGGGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAGAGAACGTTACTAAAATATAACATACTGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAACAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTCTGCCAGAATCCTCTTTTCTCCCCTAATATCATCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTATTCTGATGCTCGTTCATCACTAACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCACTTTGTGTTTACTTCCATTCCTGGGAACTAAAAGCAACATCAAAAGAAATGCCTAATGGCTGGAGCCCAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGTGTGCACCACAGGATTTGCCTGGTGTGTGTCACTGATTTCTTCATTAAACGTAATTTAGATGGTCAAACAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAACCCAAGTGGCTTATTTCACCCCTACTGCTGCTTGCCACTGCTTCCTTCTTGTAAGATTTCTTTGAAGAGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGCCAAGTCCCTTAGTCAGGGGTTGACAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCTGCTTTTGGACAAGGAGGGATGTGGAGGGAAGAAGTAATAGTCTACCAGGAAAATGAGACGAAAAAGCTCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGCACATGAGCAATGGCTCAAACGAAAAGTGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACTATTACAATGTGAAAATTCCAATGATC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CGTTTACCAGAGCAATTAGACTATGTTAAAAATTCATATCATTTGTAACTTCTTTTAATTACTGAATTGATATT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAAACAAAATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCACTTGCTACCTTTG 2738
Query 1 ------------------------------------------------------ATGGAGTCTCACTCTGTCAC 20
|.||||||||||||||||.|
Sbjct 2739 ACAACTATGAACATGATGGTTAATCTTCTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGC 2812
Query 21 CCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAA-----------CCTCTGCCTCCTGGGTTCAAGCA 83
||||||||||||.|||||||...||||||||||||||||| ||||.||||||..|.||||||||
Sbjct 2813 CCAGGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAACCTCCGCCTCCCCTCCGCCTCCCAGATTCAAGCA 2886
Query 84 ATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTT 157
.||||||..|||||||||||||||||||||.|||||.||.|||||.||||||.||||||.|||||||||.| ||
Sbjct 2887 CTTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGCGTGTACCACCACACCTGGCTAATTTTTGTA-TT 2959
Query 158 TTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------------------- 198
|||||.||||.|| ||||||||||||||||||||.||||||
Sbjct 2960 TTAGTAGAGAAGG-GTTTCACCATGTTGGCCAGGCTGGTCTCAAACCTCTGACCTCAAATGATCCACCCCCATC 3032
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3033 AGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACTGGGCAGGTTAATCTTCTTTCAAAAGAGTCTG 3106
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3107 CTCTTTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAAATGGATTAAGCACCCACTGAGTGCCT 3180
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3181 AGCATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCCCCCTTTGACTTGTCTATGACATGCTATGTCTCTCA 3254
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3255 CCAGATCCCTTCCTGGAGGTCGGGCTTCTGTAACATGGCTCTGCCCCCAAAATAAAATTTTCACCACGAGTCAG 3328
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3329 GGATCGGCAAACATTTTCTGTAAAGAGCCAGAAAGTAGATATTTTAAGTCATAAGGTCCCTGTTAACAACTACT 3402
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3403 TGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTTCCAATAAGAC 3476
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3477 TTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCATAGATTCCCAACTCATGGTGGTGAAGT 3550
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3551 ACAGAAAAAAACACCTGTCTACAAGCTTTTGTAAGAAATCAGGCTAAATGTTACCTATGTTTTGGTTGGAAGAT 3624
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3625 TTCTTTGGTTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGGATAGATGACTCTGAAAGACGCCTCTT 3698
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3699 CAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGACACAAATCCATATTGTGGAAGGAAAAT 3772
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3773 ATGTAGTGCCTTAGCTTCACTAATAGTTGTAAAACTTCTTTTTAAGACATCAAAGGCTAGAGGATTCATTTTAT 3846
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3847 GCAGTGCGAACATCTAATAACACTCTCTGTGTCAAATATATATTGTACATTACCTTAAACTATTGTAATAGCTA 3920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3921 GGTAAAAATCCTTGTATAAAAGAATGTTTTCCCCCACACAAAGGGCAGAGTATTGAGCACTAATTTCCTATTAA 3994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3995 AAGTATATATATGTATCTGTGGGTCACTGGTGTCCAGACTTGTATTTGCATTTGTGTTTACTTGAGGAACTTGA 4068
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4069 ACACTAACAACTGGTAAAATCCCATTGTAATTCTTACAGCATTTTGACTTTATTTTCCTGCAGTGAATTGTGTT 4142
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4143 GTGTAAAGATTAGGGCTTTAAAATCTTATTAGCAAGCTTTGTTTTGTTTTAATTATTGTTGCTGTTGTAACTAG 4216
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4217 ATTTAATTTATTTTTAGTTGGAGGTTTGACCTAAGTCTGGACCAATTGATTGCTTTTCAATACAACTTTGCAAA 4290
Query 199 --------------------------------------------------------- 198
Sbjct 4291 GAACTTCCTTTTTCCACAGGTGGCTTTGTTCGATTAAAGTCTACACTAATAAAAATA 4347
