Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_072999.2
Aligned Length:
4349
Identities:
173
Gaps:
4153

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAAAGAAGTTTTGAGCCAACGAGGGGAAGAAAGGAGTTGGGGCAAAACAGGAGGCGTTTCCCTACCCGCATAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATCCCCGTCCCCGAGACACCCAATCCCCCCACCCCCAGCCTGCCCGCGCCTCCCGCCCCCAGCTCCTCGCCCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGACAGCTGGCAGCCCCGCGCGGACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCGCCGGGGCTTTCCCGGGCGCTGCTCTCCTCCTGCTGCCCCCTCGCTAGGACCCGGCGGACGCCTCGTCTGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTCACGCCCTCTAGCCCCTACCCCCACACCCCCAAAACAGAACAGACCCCCATCCCTGGGCTGGAGGACCCGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCTTGGCAGCCAGCTGAGAAGGCGCCCCGGGGAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCTCCTCTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTCCCCTCCCGACTCTCTGCTCCTTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTCCTGCGCTCCTGCCGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGCCTCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCCTGCTGCTGCTGCGCTACCTGGTGGTCGCCCTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAACAAGTAGTCACAGCAGTAGAGTACCAAGAGGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGATTAGAGTGGAAGAAACTGGGTCGGAGTGTCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAAATCGAGCTGAGATGATAGATTTCAATATCCGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCAGCAGTTCCATCATGTGAAGTACCCTCTTCTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGAAGGGAATCCAGCTCCTGAATACACATGGTTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGACACTGGAGAATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGATCTCAACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATGCTATGCTCAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCCAGAAGAGTAATTCTTCATCTAAAGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATTTAAAGACTCCACTTTAGAGATACACC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAAGCCACCGTTGTTACACAAGTTATTAAACTATTATAAAACTCTGCTTTGTCCGACATTTGCAAAGAGGTACA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGGAAATGGAATTGGTATTTCATTTTAATTTTCATGACTACTAACTCACCTGAACTTGCTATTTTAAACAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TAGTTCTGTCGACACCTAAAATATAATCTGGCTTCTTGTGTCTGGACTAAGTTAAAAGAATTAAAATACTTTGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AATGTCCTGGGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAGAGAACGTTACTAAAATATAACATACTGAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAACAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTCTGCCAGAATCCTCTTTTCTCCCCTAATATCATCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTATTCTGATGCTCGTTCATCACTAACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGCACTTTGTGTTTACTTCCATTCCTGGGAACTAAAAGCAACATCAAAAGAAATGCCTAATGGCTGGAGCCCAC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGGTGTGCACCACAGGATTTGCCTGGTGTGTGTCACTGATTTCTTCATTAAACGTAATTTAGATGGTCAAACAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAACCCAAGTGGCTTATTTCACCCCTACTGCTGCTTGCCACTGCTTCCTTCTTGTAAGATTTCTTTGAAGAGGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGCCAAGTCCCTTAGTCAGGGGTTGACAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTCTGCTTTTGGACAAGGAGGGATGTGGAGGGAAGAAGTAATAGTCTACCAGGAAAATGAGACGAAAAAGCTCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGCACATGAGCAATGGCTCAAACGAAAAGTGGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACTATTACAATGTGAAAATTCCAATGATC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CGTTTACCAGAGCAATTAGACTATGTTAAAAATTCATATCATTTGTAACTTCTTTTAATTACTGAATTGATATT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AAAAACAAAATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCACTTGCTACCTTTG  2738

Query    1  ------------------------------------------------------ATGGAGTCTCACTCTGTCAC  20
                                                                  |.||||||||||||||||.|
Sbjct 2739  ACAACTATGAACATGATGGTTAATCTTCTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGC  2812

Query   21  CCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAA-----------CCTCTGCCTCCTGGGTTCAAGCA  83
            ||||||||||||.|||||||...|||||||||||||||||           ||||.||||||..|.||||||||
Sbjct 2813  CCAGGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAACCTCCGCCTCCCCTCCGCCTCCCAGATTCAAGCA  2886

Query   84  ATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTT  157
            .||||||..|||||||||||||||||||||.|||||.||.|||||.||||||.||||||.|||||||||.| ||
Sbjct 2887  CTTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGCGTGTACCACCACACCTGGCTAATTTTTGTA-TT  2959

Query  158  TTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT---------------------------------  198
            |||||.||||.|| ||||||||||||||||||||.||||||                                 
Sbjct 2960  TTAGTAGAGAAGG-GTTTCACCATGTTGGCCAGGCTGGTCTCAAACCTCTGACCTCAAATGATCCACCCCCATC  3032

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3033  AGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACTGGGCAGGTTAATCTTCTTTCAAAAGAGTCTG  3106

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3107  CTCTTTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAAATGGATTAAGCACCCACTGAGTGCCT  3180

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3181  AGCATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCCCCCTTTGACTTGTCTATGACATGCTATGTCTCTCA  3254

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3255  CCAGATCCCTTCCTGGAGGTCGGGCTTCTGTAACATGGCTCTGCCCCCAAAATAAAATTTTCACCACGAGTCAG  3328

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3329  GGATCGGCAAACATTTTCTGTAAAGAGCCAGAAAGTAGATATTTTAAGTCATAAGGTCCCTGTTAACAACTACT  3402

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3403  TGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTTCCAATAAGAC  3476

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3477  TTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCATAGATTCCCAACTCATGGTGGTGAAGT  3550

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3551  ACAGAAAAAAACACCTGTCTACAAGCTTTTGTAAGAAATCAGGCTAAATGTTACCTATGTTTTGGTTGGAAGAT  3624

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3625  TTCTTTGGTTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGGATAGATGACTCTGAAAGACGCCTCTT  3698

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3699  CAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGACACAAATCCATATTGTGGAAGGAAAAT  3772

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3773  ATGTAGTGCCTTAGCTTCACTAATAGTTGTAAAACTTCTTTTTAAGACATCAAAGGCTAGAGGATTCATTTTAT  3846

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3847  GCAGTGCGAACATCTAATAACACTCTCTGTGTCAAATATATATTGTACATTACCTTAAACTATTGTAATAGCTA  3920

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3921  GGTAAAAATCCTTGTATAAAAGAATGTTTTCCCCCACACAAAGGGCAGAGTATTGAGCACTAATTTCCTATTAA  3994

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3995  AAGTATATATATGTATCTGTGGGTCACTGGTGTCCAGACTTGTATTTGCATTTGTGTTTACTTGAGGAACTTGA  4068

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4069  ACACTAACAACTGGTAAAATCCCATTGTAATTCTTACAGCATTTTGACTTTATTTTCCTGCAGTGAATTGTGTT  4142

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4143  GTGTAAAGATTAGGGCTTTAAAATCTTATTAGCAAGCTTTGTTTTGTTTTAATTATTGTTGCTGTTGTAACTAG  4216

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4217  ATTTAATTTATTTTTAGTTGGAGGTTTGACCTAAGTCTGGACCAATTGATTGCTTTTCAATACAACTTTGCAAA  4290

Query  199  ---------------------------------------------------------  198
                                                                     
Sbjct 4291  GAACTTCCTTTTTCCACAGGTGGCTTTGTTCGATTAAAGTCTACACTAATAAAAATA  4347

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