Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_104405.2
- Aligned Length:
- 3773
- Identities:
- 173
- Gaps:
- 3576
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCGGTGTTACCTGTGTCGTTACCGGGAGCTGTAAACAAGGTGTGCAAGCATCTGAAGAGCTGCCGGGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCAGAGAGGAGCAGCTGGAAGCCGTGGCTGCGCTCTCTTCCCTCTGCTGGGCGTCCTGTTCTTCCAGGGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTATATCGTCTTTTCCTTGGAGATTCGTGCAGATGCCCATGTCCGAGGTTATGTTGGAGAAAAGATCAAGTTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGCACTTTCAAGTCAACTTCAGATGTCACTGACAAACTTACTATAGACTGGACATATCGCCCTCCCAGCAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCACACAGTATCAGTTTTGGCACCATGCTTTCCTCTGTGGCCCTTCTTTCCATCCTTGTCTTTGTGCCCTCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCGTGGTGGTTGCTCTGCTGCTGGTGAGAATGGGGAGGAAGGCTGCTGGGCTGAAGAAGAGGAGCAGGTCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTATAAGAAGTCATCTATTGAGGTTTCCGATGACACTGATCAGGAGGAGGAAGAGGCGTGTATGGCGAGGCTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGTCCGTTGCGCTGAGTGCCTGGATTCAGACTATGAAGAGACATATTGATGAAAGTCTGTATGACACAAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTCACCTAAAGACAGGAAACATCCCATTCCACTGGCAGCTAAAGCCTGTCAGAGAAAGTGGAGCTGGCCTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCATAGCGATGGACAATCCTGGAGATCATCAGTAAAGACTTTAGGAACCACTTATTTATTGAATAAATGTTCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTGTATTTATAAACTGTTCAGGAACTCTCATAAGAGACTCATGACTTCCCCTTTCAATGAATTATGCTGTAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGAATGAAGAAATTCTTTTCCTGAGCAAAAAGATACTTTTTGATTCATCTTTGCTCTGGAATGTATTACATGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTTCCAACTGTTTGAAGGAGAATTTTGAATGTTTGCCACACCGCTGATACCCAAATAATTTTTTAAATGAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGCTTGTGGCTTCCTGATGTGTCACCAGACAAAATATTCGCTTGGGATATGTATTCTTTGTTTTTTGCTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTACACTTTCAGCTGTGAGTTAGTATAGGGCGTATACTTACCGGTTTAATGACCTCAACCTCAGTTGTGTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGATAACTTAGGGTGTATACCCTTAGTTTCCTTAGAGTTGGTAGGATCAAGTCATTGGTTTGCTTTGACTGGGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTTAAAGTATTAAGTACAGTGTCATCAATTTACAGTTAAGGAAAGGAATCGTGAAGTAGAAAAATTATTTTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAGTCTTGCTGGTACAATTTGGGCTAAGGAGTCTTTGTTATTTTCTGTCTTGCTTTTTTTTTTTTTTTTTTTT 1332
Query 1 -----ATG--GAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGC 67
|.| ||||||||||||||| .|||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1333 TTTTGAGGCAGAGTCTCACTCTGTC-GCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCTGC 1405
Query 68 CTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTG 141
|||||||||||||||.|||||....||||||||||.|.|||||||||||||||||.|.||.|||||||.|||..
Sbjct 1406 CTCCTGGGTTCAAGCGATTCTTGTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGCCACCACACCCA 1479
Query 142 GGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT----------------- 198
|.|||||||||..||||||||.||||.||.||||||||||.|||||||||.||||||
Sbjct 1480 GCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATTTTGGCCAGGATGGTCTCAATCCCCTGACCTCGT 1553
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1554 GATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGTGCTTGGCCTGTTATTTTATT 1627
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1628 TTCTTATAACTACAACTTTTCTTCTTGAATTTTCAGGTCAGAGGCAAGAAAAACTCTTTACAGGTTTTTAGTGG 1701
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1702 GGGGCTTATGGAGTATTTCAGGAGTTCTTTGCAAATTAAATCATCTTTTCACTTGTATTGTTTTTCAAAACTTT 1775
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1776 GTTGATTTCTAAAATGTGCCAACTGTGAGTAAACTATGGTATTTGCAAGTGGTTTTTACATAATATTTGAGATG 1849
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1850 AGGAAGTGAGATTGTGCATGACATACTTCTCCTTTGTATTCTCTCAGTGCCTTACAGCAGGTTACTCCATTCTG 1923
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1924 CTATGACAACTTGTTTCAAATGTTAATTTACATAGGATTTTTTATAAGCCATTAAGGCATATGTATAGTATATC 1997
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1998 AGTAAAGATGGATGGTGCATATATAAATAGTCTTCTGTAATAGTGATTGGATTTACTTCTCAATTATGAGAGAC 2071
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2072 AAAAATTATCCCCTCACCTGTCTCTATTCTTTCAACAGGTTGATCCCTTTTCATGATTTTTCATTAGGTGGTTC 2145
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2146 AGGAAGTTTCCATATTACAGCGCTTCAGACTGTATATGTTAGTTTAAAAATCACTTTTCTCTCTCTCAACTTCT 2219
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2220 TTCTTTTTTTTTTGAAGACTTAATTTAAAAAATTTGGGTTGTTAGATCCGTATCATAGATTTGGCCTAGCCTCT 2293
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2294 TCTGTTAACCTAGTCCACAGATGAGCGAATCTGGTTAGTTGAAGGACATTGTGATTTGACTCTGGTCACGCGAG 2367
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2368 GAAGTAGAAGGGCAAAGACAGGACCGGCAGTTTACATTTCCAGTGGTTAAACCTCACGGTACTTTGGGACTGCT 2441
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2442 TGTTAACTTTTGTGGTTGTCTGAGGCCAATCTAACGTGACCATTTCTGACACCTCAACAGAGAGAGGAAAGCAA 2515
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2516 CTTGAGCAATGAGAGTAAATAACTTGGGCTCTCAGAGATTTGAAGATAGAGATCTCATTGTGAGGGGGACTATT 2589
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2590 TTGCAGGTCCTCATTTCTCCAAGAAAGAGATGGTGTTACAGGAACCCACTGAAAGCCATATCCCATTAAATGAG 2663
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2664 GAACTAATTTTGGCTGGGCCTTCTTGTAATGTCCTCGCAGGTGTGTTGTGAAGATTAATGCAGGGTAGTATGTT 2737
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2738 TGTAGATTGACACCTAGTCTAAACTTGAGGTAATTGGTGCTCTGTGAATACTCAGTCGTGTTCTTTTATAGCCT 2811
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2812 TAATCATGATTTGAACTAGTCCCTTGCTTTTTAAATGACTGAATGAAGTCCTTCGTGGTAAGGGAGTACGTTGA 2885
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2886 TAACTTAGTTTACTATATGGGTTTGTGGTCGCATCCCAGTCATCAGCTGCTATCATTTTCCTTCTTCATCCCTT 2959
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2960 ATACTGAGATTTGGGTTACAGCTTTTTATTCTTCGAAGGATCACAAAGCAGTGTACAGACACCTGCCTTCTTTA 3033
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3034 AGGATGAAAGGAAGATAAAGTGGTCTTTTTTTGTTTACTTATTTGTTTCACCTCTTGTTTGAGTAACTTCTAAG 3107
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3108 GTGCTATTCTCTCTCTCTTTTTGCTACCTCATGAGCTCTTGTCACAGCCATGGAAACCAGCCTCGTTTAGAAAG 3181
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3182 GGAACTTAGTTCAGAAGGGGTTAAAAGCCTTCCAGAATTTTTCTTTAGCTGCTGAAGTTTTTACATGTGGTTAC 3255
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3256 ATGACTTTAAGTTTTATGCATTACGCTCTTAATTCTATTACAAAATGTGGACTCACCAATTGCTTTGTGTTTTC 3329
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3330 CATGTGACCTGTTACTTCAGGCTACTTGGGGAACATCTTAGTCCTCTGTAGCTCCTGAACCCAGCACTGGTGCT 3403
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3404 TCAAGAGAGAAGGTAGCACGTCTTTGTTCAAAACAAAACAAAACGACACTTCTGGAGGCCACATCCTGAATATG 3477
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3478 AATGTTCTACTAAGTCACTCAGTTATGGTTCTAAAGGGAAACTGTAAGAAGACCCACAAGGAGTGGACCAAGAC 3551
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3552 TATTATTTAATTGCACAACTTGAAACTTTGCTGCCAGAAGAGGCAGCTCCATTCCTTTGACTCCAGTGTTGGGC 3625
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3626 TGTTAACTGCTGCACCTCATTGCCTTTTTTTGTTTTTGTTTTTGTTTTGTAGGAGGGTAGGCACTGTTGGGCCA 3699
Query 199 ------------------------------------------------------------------------- 198
Sbjct 3700 TATGCACAAATATTGTAACTCTTGGTATCTTTACTGCATCATAGTCAATAAACTTCTTTGTACCCTTTGGCTA 3772
