Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_130945.1
- Aligned Length:
- 3308
- Identities:
- 173
- Gaps:
- 3110
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTCGCGAGAGCCGCGCGGCCCCCGAAGGCTCGCAGGCGGAAGTGAGACGCCGGAAGCGGTCGTTGCCATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGGGACGACTGGCTGGTGGAATCCTTGCGCTTGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAGAATGAAATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCATCTGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCAGAAAGAGATTTCAAAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCCATGGAGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCACATACCAGATTGCTGGTTACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTCATTAAAGCTGTCAGCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGATACACAGTGAATAAGAGGTAAGCCCTGGCCTCTAAGGGCTCCTATGCTGGGGCAGGATTAGGCAGTCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGACCAGCACCCAACCAGCTGAGCAGACAATGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATGCAGACACCTTTGCCTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTGGAGAATCGCAGCCCTGGCCCTGGGTCTGGTGGAGAGAGATGGTGTGCTGAAGTTGGGAGCTGGGGCCAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGACTTGGGCCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACAGTCCAGGTCTATGATGCCACATCTTGGGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACATCTTCCTAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCATCCCTGCAGACCAAGGACTTTGTTATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCTTTGTGCCCCCCGCTGACACCAGCATCTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATCTAGGCCTCTAGAAAGGGGAGGAGCTGCTGTAGTAGCAAGGGTGCTCATGTAGGACTCAAGTGACTACCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTCCCTGTTACCAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCACTTAGCCTCAGTTTCCTTATCTGTAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGAGGATAGTAAGAACTACCTCGTAGTGATATTGCGAAGGTTAGAAGAAACGCATGGCATAATTACTTGGTAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATTGTTAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATAGGGAGAATCAAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCTAACAAATATAAACATGCTTTGTGAATTTTTTTAAAGAAAAAAATGTAGAGGGGCCAATAAACATGAAAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGGTCTCATGGGAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACAGGTGCACTTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAAGAGACATTTGCTTTTGGTGGCCCCACAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACATTTCCTTTTGAGGGCCCATAGTGAATATTAAAGTGTGCTGGACATGGTGGCTCATGCCTGTAATCCCAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTTCAGAGGCTGAGGTGGGCAGATTGCTTGAGCTGAGGAGTTTGAGACCAGCCTGGGCAACATAGCAAGATCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTCCCTTAAAAAAAAAAAAAAATTTGGCTGGGCATGGTGGCTCATGCCTGTAATCCCAGCAATGTAGGCAGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGACAGGTGGATCACTTGAGTCCAGGAGTTCGAGACTAGCCTGAGCAACATGGCGAAACCTTGTCTCTACTAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAATACAAGTTAGCTGGTTGTGGTGGTATGAGCCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGGAGGGTTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTGAGCCTGGCAGTTGAAGTTTGCAGTGAGCTGTGATCATGCCACTGTATTCCAGCCTGGGCAACAGAATGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCCTGTTACACACACACACACAAAATAGATAAGTTGTTCACTCTGTCAGCATCTATTAGCCCTTCCCATGTGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AACACTAATTACATGCTAGAAATACATAAATGAGAGGCTTCCTAAGGTGGTTGAATTTTTTTTTTTTTTTTTTT 2442
Query 1 ----------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTC 64
|||||||||..||||||||||||||||.|||||||||||||||||||.||||||||||||||||
Sbjct 2443 TGTAGTAGAGATGGAGTCTTGCTCTGTCACCCAGGCTTGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTC 2516
Query 65 TGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATAC 138
..||||.||||||||||||||.||||..|||||||||.||||||||||||||||||||.|..||.|||||||.|
Sbjct 2517 CACCTCATGGGTTCAAGCAATGCTCCTGCCTCAGCCTGCCAAGTAGCTGGGATTACAGGCACGTACCACCATGC 2590
Query 139 CTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------- 198
|..|||||||||||.||||||.||..|||.||||||||||||||||||||||..||||||
Sbjct 2591 CCAGGTAATTTTTGTATTTTTGGTACAGACGGAGTTTCACCATGTTGGCCAGAATGGTCTTGATCTCTTGACCT 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 TGTGATCTACCCACCTCGGCCTCCCGAAGAGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCAGGGGATTT 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 CTCCTGTGTGAATTCGCTGGTTAAGTGATAATTAACTGCAGTTAAAATTCAGGTCAAGCATGTGGCTCATGTCT 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 GTAATCCCAGTACTTTGGGAGGCTGAGGTGGGAGGATAGCTTGAGTCCAGGAGGAGTTCGAGATCAGCCTGGGC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 ACCATGGTGAACCCCTGTCTCTAAAAAAAAAGAAAGATTTTTATTTAAAAAACCTAAACAAATTCAGATAGGAA 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 TTTAAAGATAGACCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGTGGGGGGCCAAGGTGGGTGGATC 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 ACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATATAAAAATTA 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 GAGACGGGCATGGTGGTGGCACACCTGTAATCCCCACTACTCAGGAGGGTGAGGCAGGAGAATTGCTTGAACCT 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 GAGAGGTAGAGGCTGCAGTGAACCGAGATTGTGCCACTGCATTCCAGCCTGGGTGACAGGGTGAGACTCCATCT 3256
Query 199 ---------------------------------------------------- 198
Sbjct 3257 CAAAAAAAATAAAATAAAGATAAAATCATAAACACTCAAAAAAAAAAAAAAA 3308
