Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_146992.1
- Aligned Length:
- 2460
- Identities:
- 173
- Gaps:
- 2265
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGAAAGCCTGCCCACGTGGCTGGCGGGAGCCTCCCGGCCTGGGATTGGTCGAAAAGGAGGGGCGTGGGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTGGGGGCAGTTCCCCAGCCCAGGTCCTCCTCTCACCCGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGTCCCGGGACCAGTATGCCTTGTAATTTTTCACTGAAAGCTGGACATGATGTACCCTGTGAGAGGAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGCCCCCCGTTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCAGCGCACCTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCACGGACCCCCGCACTGTCTTTGTATCTGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGAGCTGGACTGGGCCAAGGTGATGGTGGAGAAGAGCAGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTTCCACCCCGACACTGGGGAGAAGATGAATGTCATCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCGCATGTCTTTCCAGCTTCCTGGCGGCATGATCATCACGGGCTTCATGCTCCAGTTCTACAGGACGATGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGGTGATCTTCTGGCAGTGGGTGAACCAGTCCTTCAATGCCTTAGTCAACTACACCAACAGGAATGCGGCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCCACATCAGTCAGAAAGCGCCGCCCTTGGTGGGCCGCTGGGTGCCCTTTGCCGCTGTGGCTGCGGCTAACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTCAATATCCCCATGATGCGACAGCATCTTGCTGCCAGTCATCATGGAAAGGCTTGAGAAATTGCACTTCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCGTGTGGGCTTTTCCCACAGAAATGTGAATTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAATGCCCCACTTCAGCAAGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCACACTTGTGTCCTCCTTCCCCTTTGCCAACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCTGAAGGCCAGGGTAGATTGGGGGGTGGGACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACCTCAGGGGAAAAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGTTAGGAAACCTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGATTCTGGTTCCAGCCAGGGTTGAGGAAAAGACCTTGGATCAAAAGGAAGCTTCTATACCTCTTTCTTCTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTTCCTCCTCTCCCAAGCAATGGAAACTTTTACCCATGTAATTCTAGCTGAACTCAGGAAAAAGAAGGGGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGACTCTGTCCCCTTGGGGCTCATCACCCTTCCACATCCTCCTCCTCGTTGCCCCCTGGTCAGGCAGCTTCTT 1554
Query 1 ----------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGC 58
|||||||||..|||||||.|||||||||||.||||||||||.|||||.||||||||||
Sbjct 1555 TTTTTTTTTTTTCAAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAATGCAGTGGCGCGATCTCGGCTCACTGC 1628
Query 59 AACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG---ACGTGTG 129
||.|||||||||||||.|||||||.|||||||..||||||||||.||||||||||||||||||| || .||
Sbjct 1629 AAACTCTGCCTCCTGGATTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGGCAC--CTG 1700
Query 130 CCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT----- 198
||||||..|||||.|||||||||.| ||||||||||||.||.|||||||||||.|||||||..||||||
Sbjct 1701 CCACCACGCCTGGCTAATTTTTGTA-TTTTAGTGGAGACGGGGTTTCACCATGCTGGCCAGACTGGTCTCGAAC 1773
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1774 TCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCTGAAATTGCTGGGATTACAGGCATGAGCCACCACACCCAG 1847
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1848 CCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACACTTAGGAGTTATTAGTGCTAAAAAGG 1921
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1922 GGACCGTGCAAGGCAGCAGAGTTACATGGTTCTTCAAATCATGTCTGAACCTATTCTTGGAATCTTCTCTATAA 1995
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1996 TAAGGGAAGTTCTCTTACCCCACTGCCACATACCTCTGTTTTAAAAGATAAGTCCACTAACTGTGAGTAAAAAT 2069
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2070 GATATATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG 2143
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2144 TTAAACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCTAAGAGGAAAT 2217
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2218 CAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGCCACTTCCCTTCCCCAGCTTGGCTGCCCTA 2291
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2292 GGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTTTTGTCTGGTA 2365
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2366 GGATTGCTGACTCTGTCCAACAGATATCACTGTGAATTGAATAAATTTGTTGAAAGAGCACACAGGCACACATA 2439
Query 199 ------------------ 198
Sbjct 2440 CACAAAAAAAAAAAAAAA 2457
