Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_158628.1
- Aligned Length:
- 4880
- Identities:
- 172
- Gaps:
- 4682
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATGTAGTCACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCGCCCTGTGGTGACAGCTCAGGAGGGTGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGCGGTGCAAGGTGTGCTGTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGGACTCGTGCGCTACCGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGCACGGCGGCCAGGAACACGCTCTCTTCCTCTATACGCACCGGAGGATGGCCATTACCGGGGACGATGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTTACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTACATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTGAGACGGGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCCACCTCGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCGGGCCTAAATCAGGCTTTTCTCACAGCTCTATGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTTATCACTGTTTGCATCTCCATTTTATGGACAAGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGAGCTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCGATTCTGCGACCCGGGATCCTGAATTCCTGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCAACGCCGCGCGGTTGTAACTCGGCCCTAGTTACCTGGCCAGGGTACGCGACAATTGGCGGAGGTGGTTCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCTTGCAACCAAGACAGAATAAATCCAAGTCCGAAATTACTGACATGGTTCGCTCCTCCACTATCACAGTGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGACAAGGCTCATATTTTATCCATGCAGAAGTTTGGACTGCGAGATACAATTGTGAAATCACATCTACTACAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGAAGAGGATTACACCTATATCCAGAACTTCAGGTTTTTTGCGGGAACATACAATGTAAATGGGCAGTCCCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGATCTGAGTAAGGAAGCTTTTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCTTCATCCAGATGCCAAATATGCAAAGGTGAAGCTTATCCGACTGGTTGGGATTATGCTGCTGTTATATGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAACAGGAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAGACTGTGGGGACAGGAATCATGGGGAGGATGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGAATTCTCACTTGGCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCACATTGAAGAGTATGAGAGGAGGAACCAGGACTATAAGGACATTTGTTCTCGAATGCAGTTTTGTCAGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACCCAAGCCTTCCCCCTCTCACCATCAGCAACCATGATGTGATCTTGTGGCTGGGGGACCTCAACTACAGGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAAGAGCTGGATGTGGAAAAAGTGAAAAAGCTCATCGAAGAGAAGGACTTTCAAATGCTGTATGCATATGATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTCACATTCCAGCCTACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TACAAGTATGATACGGGCTCTGACGACTGGGATACCAGGAGGATAAAGATCAGAGAATCAGTCTGAACTCTGTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTGGCTTTGAGCTTTCATGGTTGTTTTGGATGATACCCACAGGATACATGTTATCCCTTGGTGGGCCCGAATTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTCTTGCTGCCTCAGATGACTTAGCCACATGGACATGAAGGCCCTGATTCATCACTCCCCACCTGAGCCAGGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACTCGCCAGGCAGCGGGCACTGCTGTTTCTGTGAGTACTTCCAGTGTGGACTTTGCATTTCAGTGAGAAGTGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTGCTCCTGCCTGGTGTGATCGGATTCTCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACCAGAGCCACATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGGGTGAGGGTCGTAAATGACGAGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTACCGGAAGACACTGGAGGAAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTCCAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACATGCAATTGAAAGTAGAATCCTTTACAATTCATAAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGACAAGTACCCTGTCATTTTGAATTCATCAACAAGCCTGATGAAGAGTCTTACTGTAAGCAGTGGCTGAATGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAACCCCAGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAGATTGACTTGGAGCTCTTCGTAAATAAGATGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGACAGGGGAAAGGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACTTTTTGTCTGTGTCTGGGAACTACCTGCCCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTTACATGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGAGCCAATCTTGGACCTACCACTTGAAACCATTAGTGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAAATGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTCCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGAATGATTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGCCCTGCTGCTTTTCCTGGAGAGCCTTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGAGCCTGTCATCTGTTACAGCACCTACCATAACTGCTTGGAGTGTTCTGGCAACTACACAGCAAGCAAACAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTCATTTCTACTCTCCCCATATTCCACAAAAATGTCTTCCACTACTTGATGGCGTTTTTGCGAGAACTGCTGAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAATTCAGCAAAAAATCATTTGGATGAGAATATTCTAGCTAGCATATTTGGCAGCTTATTGCTTCGAAACCCAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTGGTCACCAAAAGCTTGATATGACAGAGAAGAAGAAGGCTCAAGAATTTATTCACCAGTTCCTCTGCAACCCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTCTGAGCCTCTCTCTCCTCCTATTTTACTTGAGGCTGCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCCTAGTACCCCAATTAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CATTCAATTTTCAACTTTAGTTATTTAACACAGATTTTTTTATTTTTTATTTTTTTTTATTTTGAGACGGAGTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGCTCTGTCGCGCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTGCAAGC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACACACTGCCACGCCCAGCTAATTTTTTGCAT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTTAGTAGAGACGGGGTTTCACCGTGTTGCCCAGGCTGTTCTAAAACTCCTGAACTCAGGTAATCTGCCTGCCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CGGCCTCCCCAAGTGCTAGGATTACAGATGTGAGCCACCACGCCCGGCCTTTTTTTTTTTTTTTTCTTTTTTGA 3848
Query 1 -ATGGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCT 72
|||||||.|||||| |||..|||||||||||||||..|||||||.||||||||||||||||||||||||||||
Sbjct 3849 GATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCTCCT 3922
Query 73 GGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA 146
.|||||||||||||||||..||||||||||.|.||||||||||||||.||.|||..||||||||.|||||.|||
Sbjct 3923 TGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGCGTCCGCCACCATGCCTGGCTAA 3996
Query 147 TTTT----TGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------ 198
|||| ||..||||||||..|||....||||||||||||||||||||.||||||
Sbjct 3997 TTTTTTTGTGTGTTTTTAGTATAGACACGGTTTCACCATGTTGGCCAGGCTGGTCTCGAATGCCTGGCCTCAGG 4070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4071 TGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCACGCCTGGCCTAAAATGTTTT 4144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4145 TAAATAACTGTACTTGTACTCACTCACCCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATCCCCATGATCAG 4218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4219 ATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATA 4292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4293 GGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGT 4366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4367 TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCATTTAAAAA 4440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4441 ATTAAAATGACCAGGCACAGTGGCTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAGGTGGGAGCATCACTT 4514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4515 GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAGGGAGACCCCCTCTCTACAAAAACATTTTTAAAAAATTA 4588
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4589 GCTGGGTGTGGTGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCTGACGTGGGTGGCTCACTTGAGCACAGG 4662
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4663 AGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACCCCGTCTCTA 4736
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4737 AAAATAAAATGTAAAATCACTGAAAAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTT 4810
Query 199 ---------------------------------------------------------------------- 198
Sbjct 4811 CCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATATATTTTAATGATAAATGTATTTTTAACAGTG 4880
