Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11673
Subject:
XR_001780461.1
Aligned Length:
2544
Identities:
716
Gaps:
1749

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGGCGCCTGCGCAGTGGCTCTTAGCGGGCGGTTGCTTGTTGGTTGTTGTAGTAACGGGGGAAGCAGCCTTCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCTGCGTTGATTCGGGCTGGGGAAGGAGGAGGGAGGTGAAGCAGAGCGTGGTCCCCGCCTGCCGGCCCCGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTGAGAAGATGAGACAGGAGTCTGTGCCATCCAAATTGTTTGATCCAGTGAGACTGCAAGGAAGAAAGGTCT  222

Query    1  -------------------------------------------ATGCCAATCGTGATGGCCCGGGACCTGGAGG  31
                                                       ||||||.|.||||||||||||||||||||||
Sbjct  223  CTGAGGCCTCTGTGTGCTGACTGTATGACAGACCCCAAAGGAGATGCCAGTTGTGATGGCCCGGGACCTGGAGG  296

Query   32  AAACAGCATCATCCTCAGAGGATGAGGA---GGTCATAAGTCAAGAGGATCATCCATGCATCATGTGGACTGGA  102
            |.||||||||.|||||||||||.|||||   ||.|   |..|||||||||||.|||||.||.||||||||||||
Sbjct  297  AGACAGCATCGTCCTCAGAGGACGAGGACCTGGCC---AACCAAGAGGATCACCCATGTATTATGTGGACTGGA  367

Query  103  GGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATTCTTACAAAGGACAACAATATTAGAGTAAT  176
            ||||||||||||||||||||||||||.||||||||.||.||||||.|.||||||||||||||||||.|||||||
Sbjct  368  GGCTGCAGGAGAATTCCAGTTTTGGTTTTCCATGCTGAGGCTATTTTGACAAAGGACAACAATATTCGAGTAAT  441

Query  177  TGGAGAACGTTATCATTTGTCTTATAAGATTGTACGAACGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC  250
            ||||||.||||||||||||||||||||||||||..||||||||||||||||.||.||.||||||||||||||||
Sbjct  442  TGGAGAGCGTTATCATTTGTCTTATAAGATTGTGAGAACGGACAGTCGCCTGGTGCGAAGCATTCTGACAGCCC  515

Query  251  ATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCTAATGTGGACAGGATCCCACCTGAAGCCCTTC  324
            ||||||||||||||||||||||.|||||||||||||||||..|.||||||||||||||||||||.||.||.|||
Sbjct  516  ATGGATTTCATGAAGTTCACCCGAGCAGCACTGACTATAATTTGATGTGGACAGGATCCCACCTAAAACCGTTC  589

Query  325  TTACTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTTCCCAGGTCTTATGAACTTACCCGGAAGGACCG  398
            |||||.||.||||||||||||||||||||.||||||||.||.|||||||||||||||||.|||||.||||||||
Sbjct  590  TTACTTCGAACCCTCTCTGAAGCACAAAAGGTTAATCATTTCCCCAGGTCTTATGAACTAACCCGCAAGGACCG  663

Query  399  ACTGTACAAAAACATTATTCGAATGCAGCATACACATGGATTCAAGGCTTTTCACATCCTCCCCCAGACCTTCC  472
            |||||||||||||||.|||||.||||||||.||.|||||||||||.||.||.|||||||||||.||||||||.|
Sbjct  664  ACTGTACAAAAACATCATTCGGATGCAGCACACTCATGGATTCAAAGCATTCCACATCCTCCCTCAGACCTTTC  737

Query  473  TCCTGCCAGCTGAGTACGCGGAATTTTGTAATTCATATTCGAAGGACCGGGGACCTTGGATAGTAAAACCAGTG  546
            ||||||||||||||||.||.|||||.||||||||||||||.||||||||.||||||||||||||||||||||||
Sbjct  738  TCCTGCCAGCTGAGTATGCAGAATTCTGTAATTCATATTCAAAGGACCGAGGACCTTGGATAGTAAAACCAGTG  811

Query  547  GCATCTTCAAGGGGGCGGGGCGTCTACCTGATCAACAATCCAAACCAGATCTCCCTGGAAGACAACATTTTGGT  620
            ||.|||||.||||||||||||||||||.||||||||||.|||||||||||||||||||||||.|||||.|||||
Sbjct  812  GCCTCTTCTAGGGGGCGGGGCGTCTACTTGATCAACAACCCAAACCAGATCTCCCTGGAAGAGAACATCTTGGT  885

Query  621  CTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTTGACATGCGCCTCTATGTGCTCGTGACTT  694
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  886  CTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCTCTATGTGCTCGTGACTT  959

Query  695  CCTATGATCCTCTTGTCATCTATCTCTATGAAGAAGGATTGGCTAGAAAATGCAATTGGAAGATGGGAAAT-AC  767
            ||||||||||.||||||||||||||||||||.||||||.||||||| ...|||||.||     ||.|..|| |.
Sbjct  960  CCTATGATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGCTAG-GTTTGCAACTG-----TGCGTTATGAT  1027

Query  768  CATGGATAAAAGAA----GGCTACCTATTTATG------------TACAGGTGCTT------------------  807
            ||.||.|..|||||    .||.|||..||.|||            ||||   ||.|                  
Sbjct 1028  CAAGGCTCCAAGAACATCCGCAACCAGTTCATGCACCTGACGAACTACA---GCGTGAACAAGAAGAGTGGAGA  1098

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1099  CTATGTGAGTTGTGATGACCCAGAAGTGGAGGATTATGGGAACAAGTGGAGCATGAGTGCCATGCTTAGGTACC  1172

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1173  TGAAACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGTGGAAGACCTGATCATTAAGACAATAATCTCT  1246

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1247  GCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCACACCGCAGCAGTTGTTTTGAACTGTATGGCTT  1320

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1321  TGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGGCCTGTGATG  1394

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1395  CTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACATGTTCACTGTTGTAGGATTTGTGTGCCAAGAT  1468

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1469  CCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTGAGTCTTCCAGGCGGAACCCTTTTCAGAAACC  1542

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1543  TCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAAAACCTTGTGGCCTCAGCCCGGGAGAAGGTAC  1616

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1617  CGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGAGATCAAAGTTCTCCGGAGGGTAAAGGAGGAG  1690

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1691  AATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGGAGACATGGGAAATATATGGGTCCTACCTTGA  1764

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1765  ACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTATTCCAGGACAGAGGAAACCCCAGAAGGAGCTTGC  1838

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1839  TGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACCAGAGCTAAAGGTGGAGAGCATGAACTCCAAGGCCAAG  1912

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1913  CTGCATGCCGCTCTCTATGAGAGGAAGCTACTGTCTCTGGAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGAC  1986

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 1987  AATGACGATGAAGAGCAGGAAGCATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAGTACAC  2060

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2061  ACCTTCATTGACTGTTATAGTAGAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGACTAATAAAG  2134

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2135  GTGAACCGTGCTGCAAAATCGAGGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGATTCTCCAGGACAAT  2208

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2209  GGCAATCTAAGCAAAGTACAGGCCCGGTTAGCATTCTCTGCCTATCTTCAGCATGTGCAAATCCGTCTGACAAA  2282

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2283  AGACAGTGGTGGTCAGACACTCAGTCCCAGCTGGGCTGCCAAAGAGGATGAACAGATGGAACTGGTGGTTCGTT  2356

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2357  TTCTCAAGCGAGCGTCAAGTAACCTCCAGCACTCGCTGAGGATGGTATTGCCTAGTCGGCGGTTGGCACTTCTG  2430

Query  808  --------------------------------------------------------------------------  807
                                                                                      
Sbjct 2431  GAGCGCAGGAGAATCCTTGCCCACCAGCTAGGAGACTTTATCGGTGTGTACAACAAGGAAACAGAACAAATGGC  2504

Query  808  ----------------------------  807
                                        
Sbjct 2505  TGAAAAGAAATCAAAGAAGAAACTTGAA  2532

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