Construct: ORF ccsbBroad304_11673

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000354.1_s304c1, BRDN0000406142
Derived from:
ccsbBroadEn_11673
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTLL5 (23093)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11673
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23093 TTLL5 tubulin tyrosine ligase like 5 NM_015072.5 20.2% 19.2% (many diffs)
2 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315115.1 42% 42.6% (many diffs)
3 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315114.1 41.9% 42.5% (many diffs)
4 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006516008.3 33.8% 34.2% (many diffs)
5 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XR_001780461.1 28.1% (many diffs)
6 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XR_001780460.1 24.8% (many diffs)
7 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315110.1 18.8% 19% (many diffs)
8 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515998.3 18.8% 19% (many diffs)
9 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315109.1 18.3% 18.6% (many diffs)
10 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... NM_001347395.1 18.3% 18.6% (many diffs)
11 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515996.3 18.2% 18.5% (many diffs)
12 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315108.1 18.2% 18.4% (many diffs)
13 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515995.3 18% 18.3% (many diffs)
14 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515994.3 17.9% 18.2% (many diffs)
15 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515993.3 17.9% 18.1% (many diffs)
16 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... NM_001081423.2 17.9% 18.1% (many diffs)
17 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515992.3 17.8% 18% (many diffs)
18 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515989.3 17.7% 18% (many diffs)
19 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515990.3 17.7% 18% (many diffs)
20 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515991.2 17.7% 18% (many diffs)
21 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_017315111.1 11.8% 11.8% (many diffs)
22 mouse 320244 Ttll5 tubulin tyrosine ligase-lik... XM_006515999.3 11.2% 11.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
873
ORF length:
807
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc aatcgtgatg gcccgggacc tggaggaaac agcatcatcc tcagaggatg
121aggaggtcat aagtcaagag gatcatccat gcatcatgtg gactggaggc tgcaggagaa
181ttccagtttt ggtattccat gccgacgcta ttcttacaaa ggacaacaat attagagtaa
241ttggagaacg ttatcatttg tcttataaga ttgtacgaac ggacagtcgc ctagtacgca
301gcattctgac agcccatgga tttcatgaag ttcacccaag cagcactgac tataacctaa
361tgtggacagg atcccacctg aagcccttct tactgcgcac cctctctgaa gcacaaaaag
421ttaatcactt tcccaggtct tatgaactta cccggaagga ccgactgtac aaaaacatta
481ttcgaatgca gcatacacat ggattcaagg cttttcacat cctcccccag accttcctcc
541tgccagctga gtacgcggaa ttttgtaatt catattcgaa ggaccgggga ccttggatag
601taaaaccagt ggcatcttca agggggcggg gcgtctacct gatcaacaat ccaaaccaga
661tctccctgga agacaacatt ttggtctccc gttacattaa caaccccctg ctcatagatg
721atttcaagtt tgacatgcgc ctctatgtgc tcgtgacttc ctatgatcct cttgtcatct
781atctctatga agaaggattg gctagaaaat gcaattggaa gatgggaaat accatggata
841aaagaaggct acctatttat gtacaggtgc tttgcccaac tttcttgtac aaagtggttg
901gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
961accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)