Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11696
- Subject:
- NR_132437.1
- Aligned Length:
- 4518
- Identities:
- 1931
- Gaps:
- 2586
Alignment
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1 ACACCTGGCCATTCCAATGGAACAGACAGGGTAAGGACCAATCTGGACTGTGTTATCTTTTCCAGGTGCAAGTA 74
Query 2 TGTGCTATGGAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCA 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTGCTATGGAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCA 148
Query 76 ATGCTGCCCATCCACATGGAATTTACAAACATTCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGTGGATGA 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGCTGCCCATCCACATGGAATTTACAAACATTCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGTGGATGA 222
Query 150 TTCTGTGGAGAGGCTGTATAACATGCTCGTGGAGACGGGGGAGCTGGAGAATACTTACATCATTTACACCGCCG 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCTGTGGAGAGGCTGTATAACATGCTCGTGGAGACGGGGGAGCTGGAGAATACTTACATCATTTACACCGCCG 296
Query 224 ACCATGGTTACCATATTGGGCAGTTTGGACTGGTCAAGGGGAAATCCATGCCATATGACTTTGATATTCGTGTG 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCATGGTTACCATATTGGGCAGTTTGGACTGGTCAAGGGGAAATCCATGCCATATGACTTTGATATTCGTGTG 370
Query 298 CCTTTTTTTATTCGTGGTCCAAGTGTAGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGC 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTTTTTTTATTCGTGGTCCAAGTGTAGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGC 444
Query 372 CCCCACGATCCTGGATATTGCTGGGCTCGACACACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACTTCTGG 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCCACGATCCTGGATATTGCTGGGCTCGACACACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACTTCTGG 518
Query 446 ACCCAGAAAAGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAA 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCCAGAAAAGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAA 592
Query 520 AGAGGCAAATTTCTACGTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGA 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAGGCAAATTTCTACGTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGA 666
Query 594 ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCA 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCA 740
Query 668 TTGAGGATACATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGC 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTGAGGATACATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGC 814
Query 742 ACGCGGAACCTCTACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGC 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGCGGAACCTCTACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGC 888
Query 816 CAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTG 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTG 962
Query 890 TCCATACTCGGCAGACACGTTCCTTGCCCGTCGAATTTGAAGGTGAAATATATGACATAAATCTGGAAGAAGAA 963
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCATACTCGGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAATATATGACATAAATCTGGAAGAAGAA 1036
Query 964 GAAGAATTGCAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCT 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAAGAATTGCAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCT 1110
Query 1038 CCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTG 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTG 1184
Query 1112 TCCGAGTGACACACAAGTGTTTTATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCC 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCGAGTGACACACAAGTGTTTTATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCC 1258
Query 1186 AGAGCGTGGAAGGACCATAAGGCATACATTGACAAAGAGATTGAAGCTCTGCAAGATAAAATTAAGAATTTAAG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGCGTGGAAGGACCATAAGGCATACATTGACAAAGAGATTGAAGCTCTGCAAGATAAAATTAAGAATTTAAG 1332
Query 1260 AGAAGTGAGAGGACATCTGAAGAGAAGGAAGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATTACAATAAAG 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGAAGTGAGAGGACATCTGAAGAGAAGGAAGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATTACAATAAAG 1406
Query 1334 AGAAAGGTGTAAAAAAGCAAGAGAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGGAAGTAGAT 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGAAAGGTGTAAAAAAGCAAGAGAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGGAAGTAGAT 1480
Query 1408 AGCAAACTGCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAA 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGCAAACTGCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAA 1554
Query 1482 GGGGGAAGAGTGCAGCCTGCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCT 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGGGAAGAGTGCAGCCTGCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCT 1628
Query 1556 GGAACCTGGGATCTTTCTGTGCTTGCACGAGTTCTAACAATAACACCTACTGGTGTTTGCGTACAGTTAATGAG 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGAACCTGGGATCTTTCTGTGCTTGCACGAGTTCTAACAATAACACCTACTGGTGTTTGCGTACAGTTAATGAG 1702
Query 1630 ACGCATAATTTTCTTTTCTGTGAGTTTGCTACTGGCTTTTTGGAGTATTTTGATATGAATACAGATCCTTATCA 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACGCATAATTTTCTTTTCTGTGAGTTTGCTACTGGCTTTTTGGAGTATTTTGATATGAATACAGATCCTTATCA 1776
Query 1704 GCTCACAAATACAGTGCACACGGTAGAACGAGGCATTTTGAATCAGCTACACGTACAACTAATGGAGCTCAGAA 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCTCACAAATACAGTGCACACGGTAGAACGAGGCATTTTGAATCAGCTACACGTACAACTAATGGAGCTCAGAA 1850
Query 1778 GCTGTCAAGGATATAAGCAGTGCAACCCAAGACCTAAGAATCTTGATGTTGGAAATAAAGATGGAGGAAGCTAT 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCTGTCAAGGATATAAGCAGTGCAACCCAAGACCTAAGAATCTTGATGTTGGAAATAAAGATGGAGGAAGCTAT 1924
Query 1852 GACCTACACAGAATGTTGCTGTTCCTGGTACCCTGTTCGGCCCCTCTAACCTCCAGAGCTATGGTCTCAGATGC 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GACCTACACAGAATGTTGCTGTTCCTGGTACCCTGTTCGGCCCCTCTAACCTCCAGAGCTATGGTCTCAGATGC 1998
Query 1926 TTCCTTT------------------------------------------------------------------- 1932
|||||||
Sbjct 1999 TTCCTTTTAGAGAGAAGGTCATTAGTCCACCAAGAAGCCAAATGACAACAGGAAAGGTGATGGGAAGATGAAAA 2072
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2073 CAAAGGAAGGTGGACTTTTGGGTATATGTTATAGCCATAGGACAGTTATGGGATGGATGGGAAGGTTAATCAGC 2146
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2147 CCCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGAGGAGCTACACAGTGTGAATGAAAACATCTATGAGTAC 2220
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2221 AGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAATTACTTGAAGGATTTAGATAGAGTATTTGCACTGCT 2294
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2295 GAAGAGTCACTATGAGCAAAATAAAACAAATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTGGTTGTCTCTG 2368
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2369 CTGAGCACGCTGTGTCAATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAACA 2442
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2443 CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACT 2516
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2517 TGAATGGAATAACGACATTCCAGAAGTTAATCATTTGAATTCTGAACACTGGAGAAAAACCGAAAAATGGACGG 2590
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2591 GGCATGAAGAGACTAATCATCTGGAAACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGC 2664
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2665 CCCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAACTTCCCCAGTATGGTGGTCCTGGAAAGGACATTTTTGA 2738
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2739 AGATCAACTATATCTTCCTGTGCATTCCGATGGAATTTCAGTTCATCAGATGTTCACCATGGCCACCGCAGAAC 2812
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2813 ACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAAAAGGAGAAGTCACAG 2886
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2887 CACCTAGAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAGATGAAACTGTTACCTTACCCTAAACACAGTAT 2960
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2961 TTCTTTTTAACTTTTTTATTTGTAAACTAATAAAGGTAATCACAGCCACCAACATTCCAAGCTACCCTGGGTAC 3034
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3035 CTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTAT 3108
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3109 CTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGCTTGGTTTTGATTTTTTGCTTGTTTGTTTGTTT 3182
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3183 TGTACTAAAACAGTATTATCTTTTGAATATCGTAGGGACATAAGTATATACATGTTATCCAATCAAGATGGCTA 3256
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3257 GAATGGTGCCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTA 3330
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3331 ATGAAGTTTTGATTCATTTTTAACCACTGGAATTTTTCAATGCCGTCATTTTCAGTTAGATGATTTTGCACTTT 3404
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3405 GAGATTAAAATGCCATGTCTATTTGATTAGTCTTATTTTTTTATTTTTACAGGCTTATCAGTCTCACTGTTGGC 3478
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3479 TGTCATTGTGACAAAGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGC 3552
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3553 TTTTGCCAGAAAATGTTGCATGTGTTTTACCTCGACTTGCTAAAATCGATTAGCAGAAAGGCATGGCTAATAAT 3626
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3627 GTTGGTGGTGAAAATAAATAAATAAGTAAACAAAATGAAGATTGCCTGCTCTCTCTGTGCCTAGCCTCAAAGCG 3700
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3701 TTCATCATACATCATACCTTTAAGATTGCTATATTTTGGGTTATTTTCTTGACAGGAGAAAAAGATCTAAAGAT 3774
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3775 CTTTTATTTTCATCTTTTTTGGTTTTCTTGGCATGACTAAGAAGCTTAAATGTTGATAAAATATGACTAGTTTT 3848
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3849 GAATTTACACCAAGAACTTCTCAATAAAAGAAAATCATGAATGCTCCACAATTTCAACATACCACAAGAGAAGT 3922
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3923 TAATTTCTTAACATTGTGTTCTATGATTATTTGTAAGACCTTCACCAAGTTCTGATATCTTTTAAAGACATAGT 3996
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3997 TCAAAATTGCTTTTGAAAATCTGTATTCTTGAAAATATCCTTGTTGTGTATTAGGTTTTTAAATACCAGCTAAA 4070
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4071 GGATTACCTCACTGAGTCATCAGTACCCTCCTATTCAGCTCCCCAAGATGATGTGTTTTTGCTTACCCTAAGAG 4144
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4145 AGGTTTTCTTCTTATTTTTAGATAATTCAAGTGCTTAGATAAATTATGTTTTCTTTAAGTGTTTATGGTAAACT 4218
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4219 CTTTTAAAGAAAATTTAATATGTTATAGCTGAATCTTTTTGGTAACTTTAAATCTTTATCATAGACTCTGTACA 4292
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4293 TATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGTGGGATGACAGAACAAACATATTTATGATCATG 4366
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4367 AATAATGTGCTTTGTAAAAAGATTTCAAGTTATTAGGAAGCATACTCTGTTTTTTAATCATGTATAATATTCCA 4440
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4441 TGATACTTTTATAGAACAATTCTGGCTTCAGGAAAGTCTAGAAGCAATATTTCTTCAAATAAAAGGTGTTTAAA 4514
Query 1933 ---- 1932
Sbjct 4515 CTTT 4518
