Construct: ORF ccsbBroad304_11696

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015399.1_s304c1, BRDN0000404649
Derived from:
ccsbBroadEn_11696
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SULF1 (23213)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11696
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23213 SULF1 sulfatase 1 XM_006716442.1 96.7% 95.6% (many diffs)
2 human 23213 SULF1 sulfatase 1 XM_006716441.1 71.8% 68.2% (many diffs)
3 human 23213 SULF1 sulfatase 1 NM_001128204.2 70.2% 69.3% (many diffs)
4 human 23213 SULF1 sulfatase 1 NM_001128205.2 70.2% 69.3% (many diffs)
5 human 23213 SULF1 sulfatase 1 NM_001128206.2 70.2% 69.3% (many diffs)
6 human 23213 SULF1 sulfatase 1 NM_015170.2 70.2% 69.3% (many diffs)
7 human 23213 SULF1 sulfatase 1 XM_024447112.1 70.2% 69.3% (many diffs)
8 human 23213 SULF1 sulfatase 1 XM_011517495.2 61.7% 58% (many diffs)
9 human 23213 SULF1 sulfatase 1 XM_017013250.2 61.7% 58% (many diffs)
10 human 23213 SULF1 sulfatase 1 XM_006716438.3 56.2% 53.4% (many diffs)
11 human 23213 SULF1 sulfatase 1 XM_006716439.3 56.2% 53.4% (many diffs)
12 human 23213 SULF1 sulfatase 1 XM_006716440.3 56.2% 53.4% (many diffs)
13 human 23213 SULF1 sulfatase 1 XM_011517494.2 56.2% 53.4% (many diffs)
14 human 23213 SULF1 sulfatase 1 NR_132437.1 42.7% 1_73del;989T>C;2006_4518del
15 human 23213 SULF1 sulfatase 1 NR_156414.2 31.9% (many diffs)
16 human 23213 SULF1 sulfatase 1 NR_156415.2 31% (many diffs)
17 mouse 240725 Sulf1 sulfatase 1 NM_001198565.1 59.6% 63.2% (many diffs)
18 mouse 240725 Sulf1 sulfatase 1 NM_001198566.1 59.6% 63.2% (many diffs)
19 mouse 240725 Sulf1 sulfatase 1 NM_172294.1 59.6% 63.2% (many diffs)
20 mouse 240725 Sulf1 sulfatase 1 XM_006495510.3 47.9% 49.2% (many diffs)
21 mouse 240725 Sulf1 sulfatase 1 XM_006495511.3 47.9% 49.2% (many diffs)
22 mouse 240725 Sulf1 sulfatase 1 XM_006495512.3 47.9% 49.2% (many diffs)
23 mouse 240725 Sulf1 sulfatase 1 XM_006495513.3 47.9% 49.2% (many diffs)
24 mouse 240725 Sulf1 sulfatase 1 XM_006495514.1 47.9% 49.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1998
ORF length:
1932
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg ctatggaact cctagttata actatgcacc aaatatggat aaacactgga
121ttatgcagta cacaggacca atgctgccca tccacatgga atttacaaac attctacagc
181gcaaaaggct ccagactttg atgtcagtgg atgattctgt ggagaggctg tataacatgc
241tcgtggagac gggggagctg gagaatactt acatcattta caccgccgac catggttacc
301atattgggca gtttggactg gtcaagggga aatccatgcc atatgacttt gatattcgtg
361tgcctttttt tattcgtggt ccaagtgtag aaccaggatc aatagtccca cagatcgttc
421tcaacattga cttggccccc acgatcctgg atattgctgg gctcgacaca cctcctgatg
481tggacggcaa gtctgtcctc aaacttctgg acccagaaaa gccaggtaac aggtttcgaa
541caaacaagaa ggccaaaatt tggcgtgata cattcctagt ggaaagaggc aaatttctac
601gtaagaagga agaatccagc aagaatatcc aacagtcaaa tcacttgccc aaatatgaac
661gggtcaaaga actatgccag caggccaggt accagacagc ctgtgaacaa ccggggcaga
721agtggcaatg cattgaggat acatctggca agcttcgaat tcacaagtgt aaaggaccca
781gtgacctgct cacagtccgg cagagcacgc ggaacctcta cgctcgcggc ttccatgaca
841aagacaaaga gtgcagttgt agggagtctg gttaccgtgc cagcagaagc caaagaaaga
901gtcaacggca attcttgaga aaccagggga ctccaaagta caagcccaga tttgtccata
961ctcggcagac acgttccttg cccgtcgaat ttgaaggtga aatatatgac ataaatctgg
1021aagaagaaga agaattgcaa gtgttgcaac caagaaacat tgctaagcgt catgatgaag
1081gccacaaggg gccaagagat ctccaggctt ccagtggtgg caacaggggc aggatgctgg
1141cagatagcag caacgccgtg ggcccaccta ccactgtccg agtgacacac aagtgtttta
1201ttcttcccaa tgactctatc cattgtgaga gagaactgta ccaatcggcc agagcgtgga
1261aggaccataa ggcatacatt gacaaagaga ttgaagctct gcaagataaa attaagaatt
1321taagagaagt gagaggacat ctgaagagaa ggaagcctga ggaatgtagc tgcagtaaac
1381aaagctatta caataaagag aaaggtgtaa aaaagcaaga gaaattaaag agccatcttc
1441acccattcaa ggaggctgct caggaagtag atagcaaact gcaacttttc aaggagaaca
1501accgtaggag gaagaaggag aggaaggaga agagacggca gaggaagggg gaagagtgca
1561gcctgcctgg cctcacttgc ttcacgcatg acaacaacca ctggcagaca gccccgttct
1621ggaacctggg atctttctgt gcttgcacga gttctaacaa taacacctac tggtgtttgc
1681gtacagttaa tgagacgcat aattttcttt tctgtgagtt tgctactggc tttttggagt
1741attttgatat gaatacagat ccttatcagc tcacaaatac agtgcacacg gtagaacgag
1801gcattttgaa tcagctacac gtacaactaa tggagctcag aagctgtcaa ggatataagc
1861agtgcaaccc aagacctaag aatcttgatg ttggaaataa agatggagga agctatgacc
1921tacacagaat gttgctgttc ctggtaccct gttcggcccc tctaacctcc agagctatgg
1981tctcagatgc ttccttttac ccaactttct tgtacaaagt ggttggtaag cctatcccta
2041accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
2101agtcgacaat caacctctgg atta

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