Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11737
- Subject:
- XM_011538098.2
- Aligned Length:
- 2298
- Identities:
- 1122
- Gaps:
- 1164
Alignment
Query 1 ATGCGGCTGTGGAAGGCGGTGGTGGTGACTTTGGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGTCTTCAGCCACCTGGACCGCAGCCTCCTGGAGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTGGGCAGCCTGCCTGTACCGCAGCTGCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGTCATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACATTTCACTCGGCGCATCCTTCCTGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCAGGGGCGGCCACCGAGGCTGAGGGCTTCCCTGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCTGCAGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CAGCTCTGGGAGAGACCTTCCTGCCCTACTACACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATG 666
||||||||||||||||||||||||||
Sbjct 1 ------------------------------------------------ATGGCATCGTCATCCAGAAAAGCATG 26
Query 667 GATCAGTTCAGCACGGCTGTCGTCATCGTGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGG 740
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 27 GATCAGTTCAGCACGGCTGTCGTCATCGTGTGCCTGCTGGCCATTG--------------GCAGGTATTCGGGG 86
Query 741 CGGCATTTTTACCCTCATATTTGCCAGACTGAACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 CGGCATTTTTACCCTCATATTTGCCAGACTGAACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCC 160
Query 815 AGGAGACAAGCTTCTTTGATGAGAACCGCACAGGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 AGGAGACAAGCTTCTTTGATGAGAACCGCACAGGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTC 234
Query 889 AGCGACCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 AGCGACCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCAT 308
Query 963 GTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCT 382
Query 1037 ACGGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 ACGGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAG 456
Query 1111 ACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 ACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCT 530
Query 1185 GCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 GCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACAC 604
Query 1259 TGCTGGTGGTCCAGGTCAGCATCCTCTACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAAC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 TGCTGGTGGTCCAGGTCAGCATCCTCTACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAAC 678
Query 1333 CTCATCGCCTTCATCATCTACGAGTTTGTCCTGGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 CTCATCGCCTTCATCATCTACGAGTTTGTCCTGGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCT 752
Query 1407 GATGCAGGGAGTGGGGGCTGCTGAGAAGGTGTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 GATGCAGGGAGTGGGGGCTGCTGAGAAGGTGTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCA 826
Query 1481 GCTTGGCCCCCGACCACCTGGAGGGCCGGGTGGACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCAC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 GCTTGGCCCCCGACCACCTGGAGGGCCGGGTGGACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCAC 900
Query 1555 ACCCAGGTCCTGCAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 ACCCAGGTCCTGCAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAG 974
Query 1629 TGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 TGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCA 1048
Query 1703 AGCCCATCAGCGCCTACGACCACAAGTACTTGCACCGTGTGGTAT-----GTG---CACGGGCCTGGGC----- 1763
|||||||||||||||||||||||||||||||||||||||||.|.| ||| ||.|.|||.|.||
Sbjct 1049 AGCCCATCAGCGCCTACGACCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTC 1122
Query 1764 -----------CAC-----ACTTCTCC--------GCCCTTTCTGCATC------------------------- 1788
||| ||.||||| ||||..|.|||.|.
Sbjct 1123 GCCCGCTCCATCACGGATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACA 1196
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1197 GAAGGCCAATGCCCACGGCTTCATCATGGAACTCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCC 1270
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1271 AGCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGCCCGGGCTCTGGTGCGGAACCCCCCAGTCCTCATCCTG 1344
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1345 GATGAAGCCACCAGCGCTTTGGATGCCGAGAGCGAGTATCTGATCCAGCAGGCCATCCATGGCAACCTGCAGAA 1418
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1419 GCACACGGTACTCATCATCGCGCACCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGTGGTGCTGGACAAGG 1492
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1493 GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGG 1566
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1567 CAGATGCTGGGGCTTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACGAGCCTGTAGCCAACGGCAGTCACAA 1640
Query 1789 ---- 1788
Sbjct 1641 GGCC 1644
