Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11745
- Subject:
- XM_006521565.3
- Aligned Length:
- 1496
- Identities:
- 939
- Gaps:
- 457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC 148
Query 1 ---------------------------------------------------------ATGGAGAAAAAGAAA-- 15
|||||.....||.||
Sbjct 149 GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG 222
Query 16 -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT 88
|||| .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 223 GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT 292
Query 89 TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC 162
|.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct 293 TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC 366
Query 163 GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC 235
.||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct 367 AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC 439
Query 236 AAAATGGATCTCTTACGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAAT 309
|.|||||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct 440 AGAATGGATCTCTCACGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAAT 513
Query 310 TCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCG 383
|||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.||||||||||||||
Sbjct 514 TCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCG 587
Query 384 GCAGATGTTTGG------------------------------------------------------GGGATTCG 403
|||||||||||| ||||||||
Sbjct 588 GCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCG 661
Query 404 GGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGC 477
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 662 GGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGC 735
Query 478 CGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGG 551
|||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.||||||||||||||
Sbjct 736 CGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGG 809
Query 552 TTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG 625
.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 810 CTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATG 883
Query 626 TGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCA-- 697
||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.||||||
Sbjct 884 TGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGT 957
Query 698 ----------TTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAG 761
|||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.||||
Sbjct 958 CTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAG 1031
Query 762 GGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGG 835
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 GGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGG 1105
Query 836 TTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA-------- 887
||||||||||||||||||||||||||||||||||| |.|| ||.||| ||..|||
Sbjct 1106 TTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTC 1179
Query 888 ----------------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA----- 918
|.||||| .|||| .| |.|||||| || ||
Sbjct 1180 AGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTG 1248
Query 919 ------GCCACCGCTGCTGCAGCCGCTGTAGCCGC-----TTAC------------------AGTGAC----GG 959
||||..||| |.|.|| .|| |||| ||.||| .|
Sbjct 1249 GTATGGGCCAGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTG 1311
Query 960 TTATGGCAGGG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAG 1013
|||.||.|.|| ||| ||.|| |..||| || .|||||.|.|.|||...|||| ||||
Sbjct 1312 TTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT-- 1383
Query 1014 CTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGCCCC 1070
||| |.|.|||..|||||| || .|||||| |||| ||.|| |||.|.| ||
Sbjct 1384 CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CC 1445
Query 1071 CTAC------------ 1074
|.|.
Sbjct 1446 CAAGAGAATGCTGGGA 1461