Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11745
• Subject: XM_006521567.3
• Aligned Length: 1465
• Identities: 929
• Gaps: 443

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  --------------------------ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCGACAACA  48
                                      |||                     |||||||||||||||||.||||||
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATG---------------------CAGGGTAACCAGGAGCCAACAACA  201

Query   49  ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGA  122
            ||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.|||||||||||||||||
Sbjct  202  ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGA  275

Query  123  GTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGC  196
            .|||||.||||||||||||||.||||||||||||||||||.||||.|||||||||||.||||||||.|||||||
Sbjct  276  ATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC  349

Query  197  AAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTAC---GACAGAAGGTGGAGC  266
             |||| ||.||.||.|||||.|||||.||||||||||..||.|||||||||||.||   |||||||||||||||
Sbjct  350  -AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACCAGAATGGATCTCTCACGCAGACAGAAGGTGGAGC  422

Query  267  ACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGC  340
            ||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.|
Sbjct  423  ACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACGCCCAAGCGACTAC  496

Query  341  ATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCGGCAGATGTTTGG-------------------  395
            ||||||||||||||||.|||||||||||.||||||||||||||||||||||||||                   
Sbjct  497  ATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTA  570

Query  396  -----------------------------------GGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC  434
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  571  GATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC  644

Query  435  AGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCAC  508
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  645  AGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCAACAGCAC  718

Query  509  GTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTA  582
            |.||.||||||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.
Sbjct  719  GGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTG  792

Query  583  TATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCT  656
            ||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|
Sbjct  793  TATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTT  866

Query  657  ATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCA------------TTCCTGGCTTCCCTTACCCTA  718
            .|||||||||||.||.||||||||||||||.|||.||||||            |||||||||||||||||||.|
Sbjct  867  GTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAA  940

Query  719  CTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTC  792
            |||||||||||||||||||.||||||.|||||||||||.||||||||||||||||||||||.||||||||||||
Sbjct  941  CTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTC  1014

Query  793  CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT  866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT  1088

Query  867  CTAT---GGTG--GATATG---------CAGCCTA------------------------------CAGATATGC  896
            ||||   |.||  ||.|||         ||..|||                              |.||||| .
Sbjct 1089  CTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-A  1161

Query  897  ACAGCCT--GCTACTGC--------------AACCGCA-----------GCCACCGCTGCTGCAGCCGCTGTAG  943
            |||| .|  |.||||||              ||   ||           ||||..|||       |.|.||   
Sbjct 1162  ACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCCAGGGCT-------CGGGTG---  1221

Query  944  CCGC-----TTAC------------------AGTGAC----GGTTATGGCAGGG--TGT--ACACA---GCCGA  983
             .||     ||||                  ||.|||    .||||.||.|.||  |||  ||.||   |..||
Sbjct 1222  -GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTATGGAATGTTAACTCAAGTGGTGA  1294

Query  984  C---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---  1041
            |         ||   .|||||.|.|.|||...|||| ||||  ||| |.|.|||..||||||       ||   
Sbjct 1295  CTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAATTGAGGCTGTG-------TACTT  1358

Query 1042  TACCGAG---GTGGCTACAG-----------CCGATTTGCCCCCTAC------------  1074
            .||||||   |||| ||.||           |||.|.|   |||.|.            
Sbjct 1359  CACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAATGCTGGGA  1413