Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11745
Subject:
XM_006521596.3
Aligned Length:
1302
Identities:
422
Gaps:
828

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGGGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAG---GGCCAGGGAGA  451
            ||||||||||||||||                                         |||   |||        
Sbjct  588  CCGGCAGATGTTTGGG-----------------------------------------CAGTTTGGC--------  612

Query  452  AATTACACGGCACCGTGGTAGAGGGCCGTAAAATC---GAGGTG--AATAATGCTACAGCACGTGTAATGA---  517
                                         ||||||   ||.|||  ||||||          .|.||||||   
Sbjct  613  -----------------------------AAAATCCTAGATGTGGAAATAAT----------CTTTAATGAGCG  647

Query  518  -----CCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATG  586
                 ||   |||.||||       ||||.|||...||       |||...|||..||                
Sbjct  648  CGGCTCC---AAGGAGAT-------CCATCTGCTTTTG-------ATTTCTCCCTTTA----------------  688

Query  587  GTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCA  660
                 .|||||.|||||         ||                                              
Sbjct  689  -----AAGTTACATGCA---------TT----------------------------------------------  702

Query  661  GGAAGAGGGGGTATCAACACTTACATTCCTTTAATCATTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGC  734
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  735  AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAA  808
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  809  CAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCA  882
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  883  GCCTACAGATATGCACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGTAGCCGCTTACAGTGA  956
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  957  CGGTTATGGCAGGGTGTACACAGCCGACCCCTACCATGCCCTTGCCCCTGCCGCTAGCTATGGAGTTGGCGCTG  1030
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1031  TGGCGAGTTTATACCGAGGTGGCTACAGCCGATTTGCCCCCTAC  1074
                                                        
Sbjct  703  --------------------------------------------  702