Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11767
- Subject:
- NM_027972.1
- Aligned Length:
- 1653
- Identities:
- 1202
- Gaps:
- 255
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCACTAAGGCCAGGGGATGCCTCAAGCTCTGCTTCCACCGCTTCCAACCGGTCACGGACTAGGACTCGCTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGAACCAAAGCCATGAACTCTGAGGTAGACGAGAGCCTCTTTGGAGGTGTCAAGCCTTCATCCCAGGGCAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGACAGCCCTATCGTGGTGATCCATGATAAACACGCTATCCGGAAAACTCTCAGTGCTCTGGGCTTGGAGCAC 222
Query 1 ---------------------------------ATGGTCCGAGAACTCATTGTTCCCACAGAGGATCCCTCCGG 41
||||||.|||||||||||||||||||||||||.|||||.||
Sbjct 223 AAGACGGAGACGATCCAGCTCATCACTAGAGACATGGTCAGAGAACTCATTGTTCCCACAGAGGACCCCTCTGG 296
Query 42 GGAGTCCCTAATCATCAGCCCTGAGGAGTTTGAGCGAATCAAATGGGCATCCCATGTCCTGACCAGAGAAGAAC 115
|||.||.||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||||.||||||||
Sbjct 297 GGAATCGCTAATCATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAAC 370
Query 116 TTGAGGCCAGGGACCAGGCCTTCAAGAAGGAGAAGGAAGCCACCATGGATGCAGTGATGACACGAAAGAAGATC 189
|..|.|||||.||.||||||.||||||||||||||||||.||.|.||||.||.||.|..|..||.||||||||.
Sbjct 371 TGAATGCCAGAGAACAGGCCCTCAAGAAGGAGAAGGAAGGCATCTTGGAAGCCGTCACAATTCGCAAGAAGATT 444
Query 190 ATGAAACAGAAGGAGATGGTGTGGAACAACAACAAGAAGCTCAGTGACCTGGAGGAGGTGGCCAAGGAACGGGC 263
|||||.||||||||||||...||||||||.||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 445 ATGAAGCAGAAGGAGATGACTTGGAACAATAACAAGAAGCTCAGTGACCTGGAGGAGGTGGCCAGGGAACGGGC 518
Query 264 CCAGAACCTCCTGCAGAGAGCCAACAAGCTGCGGATGGAGCAGGAGGAGGAGCTCAAGGACATGAGCAAGATTA 337
||||||||||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCAGGAGGAGGAGCTCAAGGACATGAGCAAGATTA 592
Query 338 TCCTCAATGCTAAGTGCCATGCCATCCGGGATGCCCAAATCCTGGAGAAGCAGCAGATCCAAAAAGAACTGGAC 411
|.||.|||||.||||||||.||.||||||||||||||.||.|||||||||||||||||.|||||.|||.||||.
Sbjct 593 TTCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATACAAAAGGAATTGGAT 666
Query 412 ACAGAAGAGAAGCGGTTGGATCAGATGATGGAAGTGGAGCGGCAGAAATCCATTCAAAGGCAGGAGGAACTGGA 485
..|||.||||.||||||||||||.|||||||||.|.||.||||.|.|||||.|.||||||||||||||.|.|||
Sbjct 667 GAAGAGGAGAGGCGGTTGGATCACATGATGGAAATAGACCGGCGGGAATCCCTCCAAAGGCAGGAGGATCGGGA 740
Query 486 GAGGAAGAGGAGGGAGGAAAGAATTAGAGGAAGGCGGCAAATTGTGGAACAGATGGAAAAGAACCAGGAGGAGC 559
.|||||..||||||||||.|||.|..|.||||..|||||.||.|||||.|||||..|.||||||.||||||||.
Sbjct 741 AAGGAAACGGAGGGAGGAGAGAGTACGGGGAAAACGGCACATCGTGGAGCAGATAAAGAAGAACGAGGAGGAGA 814
Query 560 GATCGCTGCTTGCTGAGCAGCGGGAGCAGGAGAAGGAGCAGATGCTGGAATATATGGAACAGCTCCAAGAGGAA 633
|||||||||..||.|||||.||.||.||||||||||||||||||||||..||..||||.|.||||||.|||||.
Sbjct 815 GATCGCTGCAGGCGGAGCACCGTGAACAGGAGAAGGAGCAGATGCTGGCCTACCTGGACCGGCTCCAGGAGGAG 888
Query 634 GATCTAAAGGACATGGAACGAAGGCAGCAACAAAAACTGAAGATGCAAGCTGAGATTAAGCGCATCAATGATGA 707
|||.|..||||..||||||||||.||.||..||||||||||||||||||||||.|||||.||.|||||||||||
Sbjct 889 GATTTGCAGGATCTGGAACGAAGACATCAGGAAAAACTGAAGATGCAAGCTGAAATTAAACGTATCAATGATGA 962
Query 708 AAACCAGAAACAGAAAGCAGAACTGCTGGCTCAGGAGAAGCTGGCAGACCAGATGGTGATGGAGTTTACCAAGA 781
||||||||.||||||||||||..|||||||.|||||||..|||||||||||||||||||||||.||||||||||
Sbjct 963 AAACCAGAGACAGAAAGCAGAGATGCTGGCACAGGAGAGACTGGCAGACCAGATGGTGATGGAATTTACCAAGA 1036
Query 782 AGAAGATGGCTCGAGAAGCAGAGTTTGAGGCTGAGCAGGAGAGAATCCGGAGGGAGAAAGAGAAGGAGATCGCA 855
||||||||||||||||.|||||||.|||.|||||||||||||.||||||||||||||||||||||||||||||.
Sbjct 1037 AGAAGATGGCTCGAGAGGCAGAGTATGAAGCTGAGCAGGAGAAAATCCGGAGGGAGAAAGAGAAGGAGATCGCC 1110
Query 856 CGCTTGAGGGCCATGCAGGAGAAGGCCCAGGATTACCAGGCAGAACAGGATGCCTTGCGGGCCAAGCGCAACCA 929
|||.||||||||.|||||||||||||.||||||||.||.|||||.|||||||||||||||||||||||||||||
Sbjct 1111 CGCCTGAGGGCCTTGCAGGAGAAGGCGCAGGATTATCAAGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCA 1184
Query 930 GGAGGTTGCAGACAGAGAGTGGCGCAGAAAGGAAAAGGAAAATGCGCGGAAGAAGATGGAAACAGAGGCTGAGC 1003
||||||||||||..||||||||||..|||||||||||||||||||||.|||||||||.||.|||||||...|||
Sbjct 1185 GGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAAAGGAAAATGCGCAGAAGAAGATAGAGACAGAGGAAAAGC 1258
Query 1004 TGCGAAAAAGTCGGCTCGAACAGGTGGCTTTCAAGGAGCACGCTCTGGCTGTTCAGGTGCAACGGGACCGGGAT 1077
||||.|||||.|||||.||.||||||||.||||||||.|||.|.|||||.||||||||.||.||.|||||.|||
Sbjct 1259 TGCGCAAAAGCCGGCTGGAGCAGGTGGCATTCAAGGAACACACGCTGGCCGTTCAGGTTCAGCGTGACCGAGAT 1332
Query 1078 GAGTTCGAGAGGATTCTTCGGGCTCAGAGAGAACAGATTGAGAAGGAGCGGCTGGAGGAGGAGAAAAAGGCCAC 1151
||||||||||||||.|||||||||||||||||.||||||||||.||||..||.|||..|||||||.||.||||.
Sbjct 1333 GAGTTCGAGAGGATCCTTCGGGCTCAGAGAGAGCAGATTGAGAGGGAGAAGCAGGAACAGGAGAAGAAAGCCAA 1406
Query 1152 AGGGCGCTTACAGCATGCCAATGAGCTCCGGCGCCAGGTGCGCGAGAACCAGCAGAAGGAAGTGCAGAACCGGA 1225
.|||.||.|.|||||||||||.||||||||.||.||||||||.||||||||||||||..|.||||||||||||.
Sbjct 1407 GGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGC 1480
Query 1226 TTGCCACCTTTGAGGAGGGCCGGCGCCTCAAAGAGGAGGCCCAGAAACGCCGTGAGCGCATCGATGAGATCAAG 1299
|.||.|||||.||.||||||||.||||||||.|||||.||..||||.|||||.|||||||||||.||.||||||
Sbjct 1481 TCGCTACCTTCGAAGAGGGCCGCCGCCTCAAGGAGGAAGCTGAGAAGCGCCGCGAGCGCATCGAGGACATCAAG 1554
Query 1300 AGGAAAAAGCTTGAAGAGCTGAGAGCCACTGGCCTTCCCGAGAAGTACTGCATTGAAGCTGAGCGCAAAGCTAA 1373
|...|.|||||.|||||||||||||||||.||||||||.||||||||||||||.||||.||||||.|||||.||
Sbjct 1555 AAACAGAAGCTGGAAGAGCTGAGAGCCACCGGCCTTCCTGAGAAGTACTGCATCGAAGTTGAGCGTAAAGCCAA 1628
Query 1374 CATCCTGCCAGCTACCTCTGTGAAC 1398
||||||||||||.||.|||||.|||
Sbjct 1629 CATCCTGCCAGCCACTTCTGTTAAC 1653
