Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11806
- Subject:
- NM_001081295.1
- Aligned Length:
- 2608
- Identities:
- 809
- Gaps:
- 1706
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACGGCGAAAGCGAGGTGGATTTTTCCAGCAACGGCGTCACCCCTTTGTGGCGGAGACGGTCCACCCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCTGCTGATCACCGACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCTGTGGAGGAGCTGGCTGCCCTTCCCACGCCGCAGACTCCGGTCCGCGTACCCGCCGACCCGGACGACAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACGGTGTCCAGGAGCCCCCAGCTTCTGAGCGCGCATCGGAGGCCGGTGACCAATGGTCGCACGGTGTCCCCGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTACAGAGCTGCTTCTCCTCGACTCCGACGGCCCAAGTCACCCCTGGTTTCTTACGCGGCGTCGGGCGGCTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAAGTCCACTTCTAATGGCACCGTGGCCTCGCCCGCGGCGCTGTTGTCGCGCGCCTCCCGGACTCCGGACACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGCCTCTTGCGCCACCGATGAGGACTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTGCCCATAAAACCGACTCATCTGGCCCAGTATCACAAACTGGTCAGCCAGCTGGGGACTTGGAGCTGGCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCGAGACTCTCTCCTGCTCTCCCACACAAGTCTTCAGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAGTACCAACAGCCCGGCGGCCCTCAAGATGGGAAAGCAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTATCCCAAAAAGCCTTGCCTCTGAAATTAAACTGAGTAAATCCAATAGTCAGAACGTGGAGTCCCATAGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTTCTCAAGGTGCGCAGCATGGTGGAGGGACTGGGAGCACCCTTGGGCCACGAAGGGGAGGAAGGCGAAGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACAACGACATGGACAGTCCCGGCTCCCTTCGGCGAGGCTTGAGGTCCACGTCTTACAGAAGGGCAGTGGTCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGGCTTTGATTTTGACAGTCCCACCAGCTCAAAGAAGAAGAACAGAATGTCCCAGCCTGTCCTGAAGGCCGTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAAGACAAGGAGAAGTTCTCTAGCCTGGGAAGGATAAAGAAAAAAATACTGAAAGGACAAGGAACATTTGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGGGAAGAAAATGCAGTCCTGTATCAAAACTACAAAGAAAAGGCCCTTGATATCGACTCTGATGAGGAACCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCCAAGGAGCAGAAGGCAGAGGAGAGAATTGTGATTCACCACAAGCCCCTGCGCTCCACGTGGAGCCAGCTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGCGGTGAAAAGAAATGGGCTGTCTCAGACAGTGAGCCAGGAGGAAAGGAAGAGACAAGAGGCAATTTTTGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCATATCATCAGAGCATTCTTATTTACTCAGCTTGGAGATCTTGATACGGATGTTTAAAAACTCTAAGGAACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACTGATACAATGACTAAGACCGAGAGGCATCACCTTTTCTCCAACATTACCGATGTCTGGGAGGCCAGCAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATTCTTCACAGAGTTGGAAGCAAGACATCAGAATAACATCTTCATAGAGGATATCAGTGACATTGTAGAAAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACACAGCATCCACCTTTGACCCCTACGTGAAATACTGCACCAATGAAGTCTACCAACAGCGCACGCTGCAGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTGCTAGCAACCAACCCGTCCTTTAAGGAAGTGTTGTCGAGGATCGAGTCCCATGAAGACTGCAGGAACTTAC 1702
Query 1 --ATGATCTCTTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCTTCCCCTGCTGATGGATACTATCTGTCAA 72
||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct 1703 CTATGATCTCTTTTCTCATTCTCCCCATGCAGAGAGTGACACGCCTTCCCCTGCTGATGGATACTATCTGTCAA 1776
Query 73 AAAACACCTAAGGACTCTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACT 146
||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct 1777 AAAACACCCAAGGACTCTCCAAAGTATGAAGTCTGCAAAAGGGCCTTGAAGGAAGTGAGCAAGTTGGTCCGACT 1850
Query 147 ATGCAATGAGGGCGCCCGGAAGATGGAAAGGACTGAGATGATGTACACAATTAACTCCCAGCTGGAATTTAAAA 220
.||||||||.||.||.|||||||||||..||||.||||||||||||||.|||||.|||||||||||||||||||
Sbjct 1851 GTGCAATGAAGGAGCACGGAAGATGGAGCGGACAGAGATGATGTACACGATTAATTCCCAGCTGGAATTTAAAA 1924
Query 221 TTAAGCCTTTTCCTTTAGTCTCCTCTTCCCGGTGGTTGGTAAAAAGAGGTGAATTGACAGCCTATGTTGAAGAC 294
|.||||||||.||..|.|||||||||||||||||||||||.||||||||.||.||||||||||||||.||||||
Sbjct 1925 TCAAGCCTTTCCCCCTGGTCTCCTCTTCCCGGTGGTTGGTGAAAAGAGGGGAGTTGACAGCCTATGTGGAAGAC 1998
Query 295 ACTGTGCTTTTCT-CAAGAAGGACATCCAAACAGCAAGTCTACTTCTTTCTCTTTAAGGATGTGCTCATTATCA 367
||.|||||.|||| |||| ||||..|||||||||||.|||||||||||.||.||.||.||||||||.|||||||
Sbjct 1999 ACAGTGCTGTTCTCCAAG-AGGATGTCCAAACAGCAGGTCTACTTCTTCCTGTTCAATGATGTGCTTATTATCA 2071
Query 368 CCAAGAAGAAGAGTGAAGAAAGTTACAACGTCAATGATTATTCCTTAAGAGATCAGCTATTGGTGGAATCTTGT 441
|.||||||||||||||||||||.|||||.|||||||||||.||||||||.||.|||||.|||||||||||.|||
Sbjct 2072 CGAAGAAGAAGAGTGAAGAAAGCTACAATGTCAATGATTACTCCTTAAGGGACCAGCTGTTGGTGGAATCCTGT 2145
Query 442 GACAATGAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCAG 515
||||||||||||||||||||.|||||||||||||||...|||||.|||||.||.|||||||||||||||||||.
Sbjct 2146 GACAATGAAGAGCTTAATTCCTCTCCAGGGAAGAACCCTTCCACGATGCTTTACTCAAGACAGAGCTCTGCCAC 2219
Query 516 TCACCTCTTTACTCTGACAGTCCTTAGTAACCACGCGAATGAGAAAGTGGAGATGCTACTAGGAGCTGAGACGC 589
||||||||||||.|||||||||||.||.|||||.||.|.||||||.|||||.|||||||||||.||||||||.|
Sbjct 2220 TCACCTCTTTACCCTGACAGTCCTCAGCAACCATGCCAGTGAGAAGGTGGACATGCTACTAGGCGCTGAGACCC 2293
Query 590 AGAGCGAGCGAGCCCGCTGGATAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTGCAGACCGAACCTCACTG 663
||||.|||||||||||||||||.||.|||||||||||||||||.|||||.|.|||..|||||.|||||.|.|||
Sbjct 2294 AGAGTGAGCGAGCCCGCTGGATCACAGCCCTGGGACACAGCAGTGGGAAACAGCCACCAGACAGAACCACCCTG 2367
Query 664 ACCCAGGTGGAAATCGTTAGGTCATTTACTGCTAAGCAGCCAGATGAACTCTCCCTGCAGGTGGCTGACGTCGT 737
|||||||||||||||.|||||||.||||||||.||.|||||.||||||||.||||||||||||||.|||||.||
Sbjct 2368 ACCCAGGTGGAAATCATTAGGTCTTTTACTGCCAAACAGCCTGATGAACTTTCCCTGCAGGTGGCAGACGTGGT 2441
Query 738 CCTCATCTATCAACGTGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTGGTTTC 811
||||||.|||||.|||||..||||||||||||||||.|||||||||||.|||||||||||.||.||||||||||
Sbjct 2442 CCTCATTTATCAGCGTGTTGGCGATGGCTGGTATGAAGGGGAACGACTTCGAGATGGAGAGAGGGGCTGGTTTC 2515
Query 812 CTATGGAATGTGCCAAGGAGATAACATGTCAAGCTACAATTGATAAGAATGTGGAGAGAATGGGACGCTTGCTA 885
|.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||||||
Sbjct 2516 CAATGGAATGTGCCAAGGAGATAACATGTCAAGCTACTATTGATAAGAATGTGGAGAGGATGGGACGATTGCTA 2589
Query 886 GGACTGGAGACCAACGTG 903
||||||||.|||||||||
Sbjct 2590 GGACTGGAAACCAACGTG 2607
