Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11842
• Subject: NM_001164381.1
• Aligned Length: 1614
• Identities: 314
• Gaps: 1299

Alignment

Query    1  ATGCTTCAAATAAATCAGATGTTCTCAGTGCAGCTGAGTCTTGGTGAGCAGACATGGGAATCCGAAGGCAGCAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTTCAAATAAATCAGATGTTCTCAGTGCAGCTGAGTCTTGGTGAGCAGACATGGGAATCCGAAGGCAGCAG  74

Query   75  TATAAAGAAGGCTCAGCAGGCTGTTGCCAATAAAGCTTTGACTGAATCTACGCTTCCCAAACCAGTTCAGAAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TATAAAGAAGGCTCAGCAGGCTGTTGCCAATAAAGCTTTGACTGAATCTACGCTTCCCAAACCAGTTCAGAAGC  148

Query  149  CACCCAAAAGTAATGTTAACAATAACCCAGGCAGTATAACTCCAACTGTGGAACTGAATGGGCTTGCTATGAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CACCCAAAAGTAATGTTAACAATAACCCAGGCAGTATAACTCCAACTGTGGAACTGAATGGGCTTGCTATGAAA  222

Query  223  AGGGGAGAGCCTGCCATCTACAGGCCATTAGATCCAAAGCCATTCCCAAATTATAGAGCTAATTACAACTTTCG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGGGGAGAGCCTGCCATCTACAGGCCATTAGATCCAAAGCCATTCCCAAATTATAGAGCTAATTACAACTTTCG  296

Query  297  GGGCATGTACAATCAGAGA-------------------------------------------------------  315
            ||||||||||||||||||.                                                       
Sbjct  297  GGGCATGTACAATCAGAGGTATCATTGCCCAGTGCCTAAGATCTTTTATGTTCAGCTCACTGTAGGAAATAATG  370

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  371  AATTTTTTGGGGAAGGAAAGACTCGACAAGCTGCTAGACACAATGCTGCAATGAAAGCCCTCCAAGCACTGCAG  444

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  445  AATGAACCTATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGGAAAGGATGTGGATGATGACAAAGATGCAAA  518

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  519  TAAGTCTGAGATCAGCTTAGTGTTTGAAATTGCTCTGAAGCGAAATATGCCTGTCAGTTTTGAGGTTATTAAAG  592

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  593  AAAGTGGACCACCACATATGAAAAGCTTTGTTACTCGAGTGTCAGTAGGAGAGTTCTCTGCAGAAGGAGAAGGA  666

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  667  AATAGCAAAAAACTCTCCAAGAAGCGCGCTGCGACCACCGTCTTACAGGAGCTTAAAAAACTTCCACCTCTTCC  740

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  741  TGTGGTGGAAAAGCCAAAACTATTTTTTAAAAAACGCCCTAAAACAATAGTAAAGGCCGGACCAGAATATGGCC  814

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  815  AAGGGATGAACCCTATTAGCCGCCTGGCGCAAATTCAACAGGCCAAAAAGGAAAAGGAGCCGGATTATGTTTTG  888

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  889  CTTTCAGAAAGAGGAATGCCTCGACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAATGAAGTTGCTACAGG  962

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct  963  AACAGGACCTAATAAAAAGATAGCCAAAAAAAATGCTGCAGAAGCAATGCTGTTACAACTTGGTTATAAAGCAT  1036

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1037  CCACTAATCTTCAGGATCAACTTGAGAAGACAGGGGAAAACAAAGGATGGAGTGGTCCAAAGCCTGGGTTTCCT  1110

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1111  GAACCAACAAATAATACTCCAAAAGGAATTCTTCATTTGTCTCCTGATGTTTATCAAGAGATGGAAGCCAGCCG  1184

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1185  CCACAAAGTAATCTCTGGCACTACTCTAGGCTATTTGTCACCCAAAGATATGAACCAACCTTCAAGCTCTTTCT  1258

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1259  TCAGTATATCTCCCACATCGAATAGTTCAGCTACAATTGCCAGGGAACTCCTTATGAATGGAACATCTTCTACA  1332

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1333  GCTGAAGCCATAGGTTTAAAAGGAAGTTCTCCTACTCCCCCTTGTTCTCCAGTACAACCTTCAAAACAACTGGA  1406

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1407  ATATTTAGCAAGGATTCAAGGCTTTCAGGCAGCCTTAAGTGCCTTGAAACAATTTTCTGAACAAGGACTGGATC  1480

Query  316  --------------------------------------------------------------------------  315
                                                                                      
Sbjct 1481  CAATCGATGGAGCAATGAATATCGAAAAAGGTTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGAAAGCGGAC  1554

Query  316  ------------------------------------------------------------  315
                                                                        
Sbjct 1555  AATAACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTC  1614