Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11864
- Subject:
- XM_017322204.1
- Aligned Length:
- 5622
- Identities:
- 456
- Gaps:
- 5142
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGAATTGGAAGCTAAAGCTACCAAAGACGTAGAGAGAAATCTTAGCAGGGATTTAGTGCAAGAAGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGTTGATGGAAGAAAAGAAAAAGAAAAAAGACGACAAGAAAAAGAAGGAAGCTGCTCAAAAGAAGGCCACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAGCCTCAGCCTGCCAACTCTGATAACGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCCAGCAATCAGCAGCCGCCGCCACCGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGCAGCAGCCGCAGCAAGAGCAGCAGCAGCAGCAGCCACAAGCCTTGCCTCGGTATCCACGTGAAGTACCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACGATTTCGCCACCAGGAACACAAACAGCTTCTGAAGAGGGGTCAGCATTTTCCTGTCATAGCAGCAAACTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGATCTGCTGTTAAGGTGTTAAACAGCCAATCAGAAAGCAGTGCTGTAACAAATCAACAGCCACAAAATAACGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAGGTGCAGAACAGCAAGAGCCAGTCAGATATAAATCATAATACTTCAGGATCCCATTATGAAAATTGCCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGACCTGTGTCTTCTACAAGTGACTGTAGCACAAGCTGTAAGAATGCTGTAAACGACTTGTTGGAAAAAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCATGGCCCTCAGCCCCTGGCAGTGATCCTGAGTTGGCTCCAGAATGTATAGATGCTGATTCTGCCTCCAATTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAGTCAGAGAGAAACATCACTGTCATGGCTTCAGGGAACACAGGTGGTGAGAAAGATGGCCTTCGGAACAGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGGACTTGGTTCTCAAAGCAAATTTGTGGTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCATGGGGCTTTCCCCATGGAGCCCTAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAACCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGTAGTAACAATAGGATGAATGCTTGGGGCACTGTAAGTTCTTCATCAAATGGAGGGTTAAATCCAAGCACTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAAAACAATGGACTTGCCCTAAAAGGGCCTGTAGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTGGGAGTTCTGGCATCAATATTCAGTGTAGTACCATAGGCCAGATGCCTAACAATCAGAATATCAACTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTCAGTGGCTCTTCTACCCATGGTACCTGGGGTAGCCTTCAGGAAACTTGTGAGCCTGAAGTAAGTGGTACAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAGGTTTCATTCAGTGGTCAACCTCAGAATATCACCACTGAAACGACTGGACCAAATAACACTACTAACTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGACCTCTAGTTTACCAAACTCCGGTTCAGTACAAAATAATGAACTGCCTACTAGTAATCCAGGGGCCTGGCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTGAGCACAATGAATCATCCTCAGATACAGGCTCCGTCAGTTATGAATGGCACTTCCCTTTCTCACCTTAGTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGGAGAGTCAAAAACTGGAGGCTCCTACGGTACTACATGGGGTGCCTATGGTTCTAATTACTCTGGCGACAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTGCAGGCCCTAATGGCCAAGCCAATGGTGACACTGTGAATGCAACTCTAATGCAGCCTGGCATAAATGGGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATGGGCACTAACTTTCAAGTTAATACAAATAAAGGGGGAGGTGTATGGGAGCCTGGGACAGTGAATTCCCAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTCACCATGGGGAAGTGGAAATGGTGCAAATTCTGGAGGAAGTCGAAGAGGATGGGGAAGTCCTGCACAGAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACTGGCACTGGTCTATCCAGTGTCGAGTGGAACAAACTGCCTAGCAACCAGCATTCCAATGACAGTGCAAATGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAATGGTAAGAAGCTTACAAATGGATGGAAATCTACTGAGGAAGACGATCAGGGTTCTGCCACATCTCAGACAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGAGCAAAACAGTGTGTGGGCCAAAGCAGGAGGCACAGTGGAGAGTGATGGTAGTGCAGAGAGCACTGGACGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTGAAGAAAAAGTAACCGGGGAAAGTCAGAGTAGAGATAGAAGAAAAATTGATCAGCACACATTACTCCAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTGTAAACAGAACTGACTTAGATCCACGTGTCCTATCCAACTCTGGGTGGGGACAGACTCCTATTAAGCAGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATACTGCCTGGGATACAGAGACATCACCAAGAGGGGAAAGAAAGACTGACAATGGGACAGAGGCCTGGGGAAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTGCAACACAGACTTTTAACTCAGGGGCATGTACAGATAAGACTAGCCCTAATAGTAATGATACCTCATCTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATCAGGGTGGGGTGATCCCAAACCTACTCTGAGGTGGGGAGATTCCAAAGGCTCAAACTGCCAGGGGGGGTGGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGATGACTCTGCTGCTACAGGAATGATCAAGAGCAACCAGTGGGGGGGTTGCAAGGAAGACAAGTCTACATGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AATGATTCGCAAAAGAGCAAACAAGGCTGGGGTGACGGACAAAAGTCAAGCCAAGGTTGGTCCATTTCTGCCGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGATAACTGGGGAGAATCTTCCAGGAGTAACCATTGGGGTGAGGCCAATAAGAAATCCAGCTCAGGAGGCAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACAGTGACAGGTCCATTTCTGGTTGGAACGAACTTGGGAAAACTAGTTCTTTTACTTGGGGAAATAATATAAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAAATAACTCATCGGGATGGGATGAATCTTCTAAACCGAACTCTTCCCAGGGGTGGGGAGACCCTCCAAAGTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TAATCAGTCTCTAGGTTGGGGAGATTCATCAAAGCCAGTTAGTTCTCCAGATTGGAACAAGCAACAAGACATTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTGGATCATGGGGAATCCCACCAGCCACCAGCAAGCCTCCTGGTACAGGCTGGCTCGGGGGACCTATTCCTGCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCAGCAAAGGAGGAAGAACCCACAGGCTGGGAGGAGCCATCCCCAGAATCTATACGAAGAAAAATGGAGATCGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGATGGAACTTCAGCTTGGGGAGATCCAAGCAAATACAACTACAAAAATGTGAACATGTGGAATAAAAACATCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CGGAAGCCAGCGGCCGCTCAGACCAGCAAGCGCAGATGCACCGGCTATTGCCAGCCGCAAGTGCCGTCTCAAGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAGGAGACCAGCAGTGGCTCTGGCTGGGGTGAGCCTTGGGCAGAGCCTTCTACTCCAGCCACAACTGTGGATAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGTACTTCAGCCTGGGGCAAGCCCATAGACAGTGGTCCCAGCTGGGGAGAACCCATTACTGCAGCATCCAATG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CATCCACGTGGGGCTCCAGCTCTGTTGGTCCACAGTCATTAAGCAAATCTGGGCCCAAATCTATGCAAGATGGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGGTGTGGTGATGATATGCCATTGCCTGGAAGTCGACCCACTGGCTGGGAAGAGGAGGAGGATGTAGAGATTGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AATGTGGAACAGTAACTCATCTCAAGAGCTTAACTCATCTTTAAATTGGCCACCATATACCAAGAAAATGTCAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAAAGGGTCTGAGTGGCAAAAAAAGGAGAAGGGAAAGGGGAATGATGAAAGGCGGAAACAAACAAGAGGACGCA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TGGATAAATCCATTCGTTAAACAGTTTTCAAATATCAGTTTTTCGAGAGACTCACCAGAAGAAAATGTACAGAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAATAAGATGGATCTTTCTGGAGGAATGTTACAAGACAAGCGGATGGAGATTGATAAACATAGCCTGAATATTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTGATTACAATCGAACGGTCGGGAAAGGCCCTGGGTCTCGGCCTCAGATTTCCAAAGAGTCTTCCATGGAGCGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AATCCTTACTTTGATAAGAATGGCAATCCCAATATGTTTGGTGTTGGAAACACAGCAGCACAACCCCGGGGCAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GCAGCAGCCTCCAGCACAACCTCTCAGTTCATCTCAGCCTAATCTTCGTGCTCAAGTGCCTCCTCCATTACTCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCCCTCAGGTAGCCATGCTGAACCAGCTATCCCAACTAAACCAGCTTTCTCAGATCTCCCAGTTACAGCGATTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTAGCGCAGCAGCAGAGGGCACAGAGTCAGAGAAGCGCGCCTTCTGCTAACCGACAGCAGCAGGACCAGCAGGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TCGACCTCTTAGTGTGCAGCAGCAGATGATGCAACAGTCTCGTCAACTTGATCCAAGCCTGCTGGTGAAGCAGC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AGACTCCGCCTTCTCAGCAGCCGCTCCATCAGCCAGCCATGAAGTCCTTCCTTGACAATGTCATGCCCCACACT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ACACCCGAGCTGCAGAAAGGGCCATCGCCAGTAAATGCTTTCAGCAACTTTCCTATAGGCTTGAACTCAAACTT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GAATGTAAATATGGATATGAACAGTATTAAAGAGCCACAGTCACGACTAAGGAAGTGGACAACAGTGGACAGCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TGTCTGTGAACACGTCGTTGGATCAGAACTCCAGCAAACATGGTGCTATTTCAAGTGGTTTTAGGCTGGAAGAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTCCATTTGTTCCCTATGACTTTATGAATAGCAGTACTTCACCAGCCAGTCCTCCAGGTTCAATAGGAGATGG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CTGGCCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAACTGGCCACCAGAATTTCGCCCTGGTGAACCAT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GGAAAGGTTATCCAAACATTGACCCTGAAACTGACCCTTACGTCACTCCTGGCAGTGTCATAAACAGTCTTTCA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 ATTAATACTGTGCGGGAAGTTGACCACCTCAGGGACAGGAACAGTGGGTCATCCTCATCCTTGAACACCACGCT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GCCTTCAACTAGTGCCTGGTCATCCATTCGTGCCTCCAACTACAATGTTCCCCTCAGCAGTACAGCACAAAGCA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 CTTCAGCCAGAAATAGTGATTCCAAATTGACGTGGTCTCCTGGTTCAGTTACAAACACCTCTCTGGCTCATGAG 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 CTGTGGAAAGTCCCTTTGCCACCTAAAAACATCACTGCTCCGTCCCGCCCACCTCCGGGGCTGACTGGTCAGAA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GCCACCCTTGTCTACGTGGGATAATTCTCCCCTTCGTGTAGGTGGAGGATGGGGAAATTCTGATGCCAGATATA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 CCCCAGGCTCCAGCTGGGGTGAGAGCAGCTCAGGGAGAATAACCAATTGGCTTGTTCTGAAGAACCTCACACCT 5106
Query 1 ---------------------------------ATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCC 41
||||||||.|||||.|||||.||||||||.|||||||||||
Sbjct 5107 CAGATTGATGGCTCAACTCTGCGCACCCTGTGCATGCAGCATGGCCCACTGATTACATTCCATCTGAACCTCCC 5180
Query 42 TCACGGAAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTG 115
.||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5181 ACATGGAAATGCTCTGGTCCGTTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTG 5254
Query 116 TACTGGGGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAG 189
|.||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||
Sbjct 5255 TGCTGGGGAACACTACTATTCTCGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGCTTCTTTGCACAAAGTCAG 5328
Query 190 TCTCTGACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCA 263
|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 5329 TCTCTGACCCCTTCTCCTGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCTCTCGACTGTTCCCA 5402
Query 264 CTCATTCTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTC 337
|||.||||||||||||||.|||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 5403 CTCGTTCTCCAGCCGGACTGATGTCAATCACTGGAATGGTGCTGGGCTGTCGGGAGCTAACTGTGGAGACCTTC 5476
Query 338 ACGGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGA 411
||||||||||.||||||||||||||.||||||||||||||||||||||||||||| .||||||||||||||.
Sbjct 5477 ACGGCACTTCCCTCTGGGGGACCCCACATTATTCCACAAGCCTGTGGGGTCCCCC---GAGCAGCGACCCCCGG 5547
Query 412 GGAATTAGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 483
|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 5548 GGAATTAGCAGCCCATCCCCCATTAATGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGGGAGTCCATG 5619
