Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11865
- Subject:
- NM_001174084.2
- Aligned Length:
- 1729
- Identities:
- 880
- Gaps:
- 839
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATCCCAGGGGTATCTTGAAGGCATTTCCCAAGCGGCAGAAAATTCATGCTGATGCATCATCAAAAGTACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAAAGATTCCTAGGAGGGAAGAGGGAGAAGAAGCAGAAGAGTGGCTGAGCTCCCTTCGGGCCCATGTTGTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACTGGCATTGGACGAGCCCGGGCAGAACTCTTTGAGAAGCAGATTGTTCAGCATGGCGGCCAGCTATGCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCAGGGCCCAGGTGTCACTCACATTGTGGTGGATGAAGGCATGGACTATGAGCGAGCCCTCCGCCTTCTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTACCCCAGCTGCCCCCGGGTGCTCAGCTGGTGAAGTCAGCCTGGCTGAGCTTGTGCCTTCAGGAGAGGAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGTGGATGTAGCTGGATTCAGCATCTTCATCCCCAGTAGGTACTTGGACCATCCACAGCCCAGCAAGGCAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGATGCTTCTATTCCTCCTGGCACCCATGAGGCCCTGCTTCAGACAGCCCTTTCTCCTCCTCCTCCTCCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGCCTGTGTCTCCTCCCCAAAAGGCAAAAGAGGCACCAAACACCCAAGCCCAGCCCATCTCTGATGATGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGTGATGGGGAAGAAACCCAGGTTAGTGCAGCTGATCTGGAAGCCCTCATCAGTGGCCACTACCCCACCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTGAGGGAGATTGTGAGCCTAGCCCAGCCCCTGCTGTCCTGGATAAGTGGGTCTGTGCACAGCCCTCAAGCCA 740
Query 1 -------------------ATGCATCATCA-----------AAAGTACTTG-CAAAGATTCCTA---------- 33
.|.||| |||| .||||.||.| ||||| ||||
Sbjct 741 GAAGGCGACCAATCACAACCTCCAT-ATCACAGAGAAGCTGGAAGTTCTGGCCAAAG---CCTACAGTGTTCAG 810
Query 34 GGAGGGAA---GAGGG---------------------------------AGA------AGAAGC---------- 55
||||..|| ||||| ||| |.||||
Sbjct 811 GGAGACAAGTGGAGGGCCCTGGGCTATGCCAAGGCCATCAATGCCCTCAAGAGCTTCCATAAGCCTGTCACCTC 884
Query 56 --AGAAGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATAGAGATCCTGGAGAGCG 127
|..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 GTACCAGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATAGAGATCCTGGAGAGCG 958
Query 128 GGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCT 1032
Query 202 GGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCCGCAGCCAGGCCTCCCT 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCCGCAGCCAGGCCTCCCT 1106
Query 276 GACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCCAGGGAGGAGGCTACAG 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 GACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCCAGGGAGGAGGCTACAG 1180
Query 350 AGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGTGGCATGTGGTTCATAC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 AGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGTGGCATGTGGTTCATAC 1254
Query 424 CGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCCGGTCCCACCGGGGTAT 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCCGGTCCCACCGGGGTAT 1328
Query 498 CTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGAAGGGTTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 CTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGAAGGGTTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATG 1402
Query 572 GTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATC 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 GTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATC 1476
Query 646 GTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCG 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477 GTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCG 1550
Query 720 AGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATG 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 AGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATG 1624
Query 794 GCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1625 GCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCC 1698
Query 868 TACCGAGAACCTGCTGAGCGGGACTGG 894
|||||||||||||||||||||||||||
Sbjct 1699 TACCGAGAACCTGCTGAGCGGGACTGG 1725
