Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11921
- Subject:
- NM_001144906.2
- Aligned Length:
- 1212
- Identities:
- 655
- Gaps:
- 495
Alignment
Query 1 ATGGCCTCAGCCTGCCCAGGCTCTGATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGAGAGGCCT--TGGA 72
||| || |||.|.||.| .|.||| || ||.|.|.|||||| ||||| ||||
Sbjct 1 ATG-----AG-------------TGACTCCAAG--GAACCA---AG-GGTGCAGCAGCTG---GGCCTCCTGGA 47
Query 73 --------------------------------TTCCGACAGAC-------TCGAG--GAT--------ACAAGA 97
||||.|.|||| ||.|| ||| ||||||
Sbjct 48 AGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAGACTTTCAATTCCAGCAGATACATGGCCACAAGA 121
Query 98 GCT-TA--------------------GCAGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACAATCCAGGCAA 150
||| || .|||||||||||||||||||||||.|||||||||||||||||..||||
Sbjct 122 GCTCTACAGTTCCTTTTCTTCTTGGCCCAGTGTCCAAGGTCCCCAGCTCCCTAAGTCAGGAACAATCCGAGCAA 195
Query 151 GACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGA 224
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 GACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGA 269
Query 225 GATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCT 298
|||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||||
Sbjct 270 GATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCT 343
Query 299 ACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAG 372
||||||||||||||||
Sbjct 344 ACCAGGAGCTGACCCG---------------------------------------------------------- 359
Query 373 GAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGATCTACCAGGAGCT 446
Sbjct 360 -------------------------------------------------------------------------- 359
Query 447 GACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCC 520
Sbjct 360 -------------------------------------------------------------------------- 359
Query 521 GGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTG 594
Sbjct 360 -------------------------------------------------------------------------- 359
Query 595 AAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGC 668
|||||||||
Sbjct 360 -----------------------------------------------------------------GCTGAAGGC 368
Query 669 TGCAGTGGAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTA 742
||||||||||||||||||||.||.|||||||..|||.|||||||||||||||||||||||||||||||||||||
Sbjct 369 TGCAGTGGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTA 442
Query 743 ACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGCCCAGCTCGTCGTAATCAAAAGT 816
||||||||||||||||||||||||||.|||||||||||.|.||||||.||||||||||||||||||||||||.|
Sbjct 443 ACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGCTCGTCGTAATCAAAACT 516
Query 817 GCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCACCTGGATGGGACTTTCAGATCT 890
||||||||||||||||||||||||||||||.|||||||.||||||||||||.|||||||||||||||||||.||
Sbjct 517 GCTGAGGAGCAGAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCTCCTGGATGGGACTTTCAGACCT 590
Query 891 AAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGCTTCAAGCAGTATTGGAACAGAG 964
||||||||||||||||||||||||||||||||||||||||||||..|||||||||.|||.|||.||||||||.|
Sbjct 591 AAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGCTTCCAGCGGTACTGGAACAGTG 664
Query 965 GAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGGCTGGAACGACGACAAATGTAAT 1038
||||.||||||||....|||.|.||||||||.||||||||||||||||.|||||||||||||.|...||||.|.
Sbjct 665 GAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGAACGACAATCGATGTGAC 738
Query 1039 CTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATGAAGAACAGTTTCTTTCTCCAGC 1112
.|||.|||.|.||||||||||||||||.|||||| ||||||.|||.||.|||
Sbjct 739 GTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACGAA-------------------- 789
Query 1113 CCCTGCCACCCCAAACCCCCCTCCTGCG 1140
Sbjct 790 ---------------------------- 789