Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11921
- Subject:
- NR_026707.2
- Aligned Length:
- 2310
- Identities:
- 1009
- Gaps:
- 1191
Alignment
Query 1 -----ATGGCCTCAG--------CCTGCCCAGGCTCTGATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGA 61
.|||...||| |.|| || |||.|.||.| .|.||| || ||.|.|.||||||
Sbjct 1 AACATCTGGGGACAGCGGGAAAACATG---AG----TGACTCCAAG--GAACCA---AG-GGTGCAGCAGCTG- 60
Query 62 GAGGCCT--TGGA--------------------------------TTCCGACAGAC-------TCGAG--GAT- 91
||||| |||| ||||.|.|||| ||.|| |||
Sbjct 61 --GGCCTCCTGGAAGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAGACTTTCAATTCCAGCAGATA 132
Query 92 -------ACAAGAG-------------CTTAGC----------------------------------------- 104
||||||| |||.||
Sbjct 133 CATGGCCACAAGAGCTCTACAGGGTGTCTTGGCCATGGCGCCCTGGTGCTGCAACTCCTCTCCTTCATGCTCTT 206
Query 105 ------------------------------AGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACAATCCAGGC 148
||||||||||||||||||||||.|||||||||||||||||..||
Sbjct 207 GGCTGGGGTCCTGGTGGCCATCCTTGTCCAAGTGTCCAAGGTCCCCAGCTCCCTAAGTCAGGAACAATCCGAGC 280
Query 149 AAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAG 222
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 AAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAG 354
Query 223 GAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGAT 296
|||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||
Sbjct 355 GAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGAT 428
Query 297 CTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACC 370
||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.|||||||||||||||||||
Sbjct 429 CTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACC 502
Query 371 AGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGATCTACCAGGAG 444
|||||||||||.|||||||||||||||||||||||.|.|||||||||||.|||.||||||||||||||||||||
Sbjct 503 AGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAG 576
Query 445 CTGACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGAC 518
|||||.||||||||||||||||||||||||.|.|||||||||||.||||.||||||||||||||||||||||||
Sbjct 577 CTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGAC 650
Query 519 CCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGC 592
...||||||||||||||||||||||.|.|||||||||||.||||.||||||||||||||||||||||||||.||
Sbjct 651 GGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGC 724
Query 593 TGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTA---------------------- 644
||||||||||||||||||||.|.|||||..|.||.|||||||||.|.|||||
Sbjct 725 TGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATCAAGAACTGACCGATTTGAAG 798
Query 645 -------------------------------------------------------------------------- 644
Sbjct 799 ACTGCATTTGGTGAGTTCCTGCACATCAAGGGTCCTTGGGCCTGAGATGGTCTCTGTGTGATGTGACTTTACTT 872
Query 645 -------------------------------------------------------------------------- 644
Sbjct 873 GAGTTACCAACCCTGCCTGAGCCTCAGTTTCCTCCCCTGTGAAATGAGAACACGGGGTAACTGCGATCATTGCA 946
Query 645 ------------------CCAGG--------------------------------------------------- 649
|||||
Sbjct 947 CTTGGTGTTCACAGTGGGCCAGGCACACAGTAGACACTCAGTTCAACCAATCCGCTGCCTTCTGTTCTGAGCTC 1020
Query 650 ---AGCTG------------------------------------------------------------------ 654
|||||
Sbjct 1021 TAAAGCTGCTAATTCTCCCAGTCTGGAAGAGATGGAGCCAGGACTCCTGGGTTCTCCTGGGGATCAGGGAGAGT 1094
Query 655 -----------------------------------------------ACCCAGC-------------------- 661
|||||.|
Sbjct 1095 CTTGGGAAGTAGGGAGAGGAATGGTCTCTCCCCATTCCAAGCGGTCCACCCAACATGGACAGTCAAGGAAGGGC 1168
Query 662 -----------------TGAAGGCT--GCAG---TG-------------------------------------- 675
|||||||| |||| ||
Sbjct 1169 CCTGATTTTCAAGGGCTTGAAGGCTGGGCAGATATGGGAATATGGACAACCTAATCTGAGCCCAGCCCTGACCA 1242
Query 676 -------------GAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAAGGAAACTGTTACTTCA 736
|||||||||||||.||.|||||||..|||.|||||||||||||||||||||||||||||||
Sbjct 1243 GCCTCCCCCAACAGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAACTGTTACTTCA 1316
Query 737 TGTCTAACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGCCCAGCTCGTCGTAATC 810
||||||||||||||||||||||||||||||||.|||||||||||.|.||||||.||||||||||||||||||||
Sbjct 1317 TGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGCTCGTCGTAATC 1390
Query 811 AAAAGTGCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCACCTGGATGGGACTTTC 884
||||.|||||||||||||||||||||||||||||||.|||||||.||||||||||||.||||||||||||||||
Sbjct 1391 AAAACTGCTGAGGAGCAGAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCTCCTGGATGGGACTTTC 1464
Query 885 AGATCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGCTTCAAGCAGTATTGGA 958
|||.||||||||||||||||||||||||||||||||||||||||||||||..|||||||||.|||.|||.||||
Sbjct 1465 AGACCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGCTTCCAGCGGTACTGGA 1538
Query 959 ACAGAGGAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGGCTGGAACGACGACAAA 1032
||||.|||||.||||||||....|||.|.||||||||.||||||||||||||||.|||||||||||||.|...|
Sbjct 1539 ACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGAACGACAATCGA 1612
Query 1033 TGTAATCTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATGAAGAACAGTTTCTTTC 1106
|||.|..|||.|||.|.||||||||||||||||.|||||| ||||||.|||.||.|||.|...||||| .|
Sbjct 1613 TGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACGAATAGTTGTTTC--CC 1681
Query 1107 T-CCAGCCCCTGCCACC------------CCAAAC----CCCCCT------CCTGCG----------------- 1140
| |.||||.|.|||.|| |..||| |||.|| ||.|||
Sbjct 1682 TGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGTAAGCCAGCGCTTCTTCTCTCCATCCT 1755
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1756 TGGACCTTCACAAATGCCCTGAGACGGTTCTCTGTTCGATTTTTCATCCCCTATGAACCTGGGTCTTATTCTGT 1829
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1830 CCTTCTGATGCCTCCAAGTTTCCCTGGTGTAGAGCTTGTGTTCTTGGCCCATCCTTGGAGCTTTATAAGTGACC 1903
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1904 TGAGTGGGATGCATTTAGGGGGCGGGCTTGGTATGTTGTATGAATCCACTCTCTGTTCCTTTTGGAGATTAGAC 1977
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1978 TATTTGGATTCATGTGTAGCTGCCCTGTCCCCTGGGGCTTTATCTCATCCATGCAAACTACCATCTGCTCAACT 2051
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2052 TCCAGCTACACCCCGTGCACCCTTTTGACTGGGGACTTGCTGGTTGAAGGAGCTCATCTTGCAGGCTGGAAGCA 2125
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2126 CCAGGGAATTAATTCCCCCAGTCAACCAATGGCATCCAGAGAGGGCATGGAGGCTCCATACAACCTCTTCCACC 2199
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2200 CCCACATCTTTCTTTGTCCTATACATGTCTTCCATTTGGCTGTTTCTGAGTTGTAGCCTTTATAATAAAGTGGT 2273
Query 1141 ---------------- 1140
Sbjct 2274 AAATGTTGTAACTGCA 2289
