Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11948
Subject:
NM_001302946.2
Aligned Length:
1247
Identities:
160
Gaps:
1081

Alignment

Query    1  ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCTGAAGCA  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct    1  ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCCGAAGCA  74

Query   75  GTATCTATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTATCTATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAG  148

Query  149  GTATAAATGCTT--TCCATGAGAAC-------------------------------------------------  171
                 |||..||  ||.|.|||||.                                                 
Sbjct  149  -----AATTATTTGTCAAAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAG  217

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  218  TAAAGCCTCAGGATATAGATTTTGCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGG  291

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  292  ATTCGGATGATAAACAACAGAGGAGAAAAGCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGAT  365

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  366  TACTACACTACGGATTGATGTCACCACTGATGGAAGACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAG  439

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  440  ATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTAGGTTTTGATGGCACTTTATTTGACTACTTTAAT  513

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  514  GGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGCTAAACAGAGAATACAAGAGGATTATCT  587

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  588  TAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTGACCATGATCCTGAGACTTTGG  661

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  662  AAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTGGAACTGAAAAAAATT  735

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  736  CTTGTTGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACC  809

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  810  AAAGCCAGTGACTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGA  883

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  884  TCGCAAAAGAGGAGAAAAACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGT  957

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct  958  TCAGACCCATTGAAACCCTATCAAGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGA  1031

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct 1032  ACTACTGAAGTACCAAGGAGAGCACTGTCTCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAA  1105

Query  172  --------------------------------------------------------------------------  171
                                                                                      
Sbjct 1106  GTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAA  1179

Query  172  ---------------------------------------------------------------  171
                                                                           
Sbjct 1180  CAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACTTCTGAGTTACATAAAGAAGACC  1242