Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11953
- Subject:
- NM_001346460.2
- Aligned Length:
- 1805
- Identities:
- 954
- Gaps:
- 850
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTTGTCAGCACATTTACCGATATGGACACTTTTCCCAATAATTTTCCTCCTGGTGGAGACAGTGGATTGAC 74
Query 1 -------------------------ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGTTCTCAGTCGGAGTTCCAGAAAATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC 148
Query 50 AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT 222
Query 124 AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC 296
Query 198 TAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAAC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAAC 370
Query 272 AAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATAT 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATAT 444
Query 346 AATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTT 518
Query 420 AGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC 592
Query 494 TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA 666
Query 568 AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA 740
Query 642 TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT 814
Query 716 CAGCTAATTTACGGGCAGAACGCTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT 789
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGCTAATTTACGGGCAGAACGTTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT 888
Query 790 AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT 962
Query 864 GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA 1036
Query 938 GTGAACTGGATGG--ATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAG 1009
||||||||||||| || |||
Sbjct 1037 GTGAACTGGATGGTAAT------------ATG------------------------------------------ 1056
Query 1010 TAGAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTA 1083
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1084 CAAGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAG 1157
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1158 GCAATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGC 1231
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1232 TTCAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAAT 1305
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1306 TCTGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCT 1379
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1380 GAATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTG 1453
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1454 AAAAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTT 1527
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1528 CATGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCA 1601
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1602 GAAAAAGCTTGAACAGGATCTTGAGTTGGGATGCCCTTCTGTGACTGATACATACAGAGAGAGTGTATTCCCCC 1675
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 1676 CACCCCCATTGAAGAGAGATCTCTTGAAG 1704
Sbjct 1057 ----------------------------- 1056
