Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11961
- Subject:
- NR_103464.2
- Aligned Length:
- 4660
- Identities:
- 264
- Gaps:
- 4396
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGAAGCTCCGCGGTGCCTGATGGGGCCGTTGGGCGGCCGGTAGCTGTTGCTGTTGGGGGACCCCCTCATTCCT 74
Query 1 -----------------------ATGGCGGCCATCGGAGTTCACCTGGGCTGCACCTCAGCCTGTGTGGCCGTC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCGCTGCCGTCCCTGCTGCCTCATGGCGGCCATCGGAGTTCACCTGGGCTGCACCTCAGCCTGTGTGGCCGTC 148
Query 52 TATAAGGATGGCCGGGCTGGTGTGGTTGCAAATGATGCCGGTGACCGAGTTACTCCAGCTGTTGTTGCTTACTC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TATAAGGATGGCCGGGCTGGTGTGGTTGCAAATGATGCCGGTGACCGAGTTACTCCAGCTGTTGTTGCTTACTC 222
Query 126 AGAAAATGAAGAGATTGTTGGATTGGCAGCAAAACAAAGTAGAATAAGAAATATTTCAAATACAGTAATGAAAG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGAAAATGAAGAGATTGTTGGATTGGCAGCAAAACAAAGTAGAATAAGAAATATTTCAAATACAGTAATGAAAG 296
Query 200 TAAAGCAGATCCTGGGCAGAAGCCAGAAATGCGGTCCTTGGACCTGGCTTCTCAGCAATTATCCC--------- 264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAGCAGATCCTGGGCAGAAGCCAGAAATGCGGTCCTTGGACCTGGCTTCTCAGCAATTATCCCTGAGAGGGA 370
Query 265 -------------------------------------------------------------------------- 264
Sbjct 371 AGATCCTGGAGATATCCTGAGAGCACACAGAGCTTCCCCACACCTTCAGACTTGCACCTTGCTGTCCAGAAGCT 444
Query 265 -------------------------------------------------------------------------- 264
Sbjct 445 GCCTAGCCCTCCTTTCCAACCCACAATGGCCAGTGCCAATAGCAGTGCGGGCATCCGGTGGTCCAGACAGGAGA 518
Query 265 -------------------------------------------------------------------------- 264
Sbjct 519 CACGAACTCTTCTCTCCATACTAGGCGAGGCAGAGTATATTCAGCGCCTCCAGACTGTGCATCACAATGCAGAT 592
Query 265 -------------------------------------------------------------------------- 264
Sbjct 593 GTCTATCAGGCTGTGTCTAAGCGAATGCAGCAGGAGGGCTTCCGCCGCACCGAACGTCAGTGCCGCTCCAAGTT 666
Query 265 -------------------------------------------------------------------------- 264
Sbjct 667 TAAAGTTCTGAAGGCATTATATTTAAAGGCCTATGTTGCCCATGCCACAAGTATGGGTGAGCCACCACACTGTC 740
Query 265 -------------------------------------------------------------------------- 264
Sbjct 741 CATTTTATGATACGTTGGATCAGCTTCTCCGAAATCAGATAGTGACTGACCCAGACAACTTAATGGAGGATGCT 814
Query 265 -------------------------------------------------------------------------- 264
Sbjct 815 GCTTGGGCCAAGCACTGTGATCAGAACTTAGTGGCCTCTGACGCCCCAGGGGAAGAGGGAACCGGCATTCTAAA 888
Query 265 -------------------------------------------------------------------------- 264
Sbjct 889 ATCAAAAAGGACTCAGGCAGCTGATCATCAGCCTATCTTGAAAACAGTTAAGGCATCAGATGAGGATTGTCAGC 962
Query 265 -------------------------------------------------------------------------- 264
Sbjct 963 TAAGAATCAGTGACCGGATACGAGAAACCAGTGACCTTGAGGACTCCTGGGATGAATCCTCGGGTGCAGGGTGC 1036
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1037 TCTCAAGGGACCCCCAGCTACAGCAGCTCCCACAGCCTTTTCAGAGGTGCAGTTGCTCCCTGTCAGAGCAGCCC 1110
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1111 CATGGCCAGACTGGGTGTGTCCGGGGAGCCCAGCCCCTGCACCAGCACCAACCGCAGCACTCCTGGGGTAGCCT 1184
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1185 CCACACCGCAGACTCCAGTCTCCTCTTCGAGAGCTGGTTTTGTTTCTGGTGGGGATAGGCCCTTGACCAGTGAG 1258
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1259 CCCCCTCCAAGGTGGGCAAGGCGAAGAAGGCGGTCAGTGGCCAGGACTATCGCAGCCGAGTTGGCAGAAAACAG 1332
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1333 GCGATTGGCACGAGAACTCTCAAAGCGGGAGGAAGAAAAACTGGACAGGCTGATTGCTATTGGTGAGGAGGCCA 1406
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1407 GTGCTCAGCAAGATACTGCCAATGAGCTCCGCAGGGATGCTGTCATCGCAGTCAGACGTTTGGCAACAGCAGTG 1480
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1481 GAAGAGGCAACTGGTGCTTTTCAGCTAGGCCTTGAAAAATTGCTTCAGAGGTTGATTTCGAATACCAAAAGCTA 1554
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1555 GGAACCAATTACAAAAGGCTCTGCTTCCTAAACTGGTAGAAGTCTAGTTCCCAAACCTGCCTTCTGAATCCCTG 1628
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1629 GCTCCTTTTCTGTGTCCTCAGAAAAAAACATGGATGAACCATTTATATCCAGATAGTATGAAAATAATTGCTAG 1702
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1703 TTCATTTTCCCAAGATTCTCCACCAAATGGAAGACCTTTCAGAAATGCCAGGGGTGACCTAATAGAAAACGATG 1776
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1777 GAGCCACGTTCTAGACAGCTGGTTCATCCTAGCTTTGTCACAGATGTGAAGCAGTTTACCTCCCTCCAGTGGTT 1850
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1851 TCCTCATCCGTAAAATGGGGATCAATAATAACTCCTGCCCTGCCTACCTCACAGGGTTGTTGTGAGGATCACGT 1924
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1925 AGTTCATAGATGTGAAAGGGTTTAAAAGTTTAAAAGCACTGTACACATTTAAGTTATTAATTCATATGGCCTTG 1998
Query 265 -------------------------------------------------------------------------- 264
Sbjct 1999 GCTGAGGTAAGGCAGATTGGTTTACAAGATACAGAAGTATGGATATATACTGTGACTTCATTGCTTGAATCTTT 2072
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2073 CCTTTGCTGGTCTAACTTGACTGCTTCATGGAGTTTGAAATCTTAATTTTTAAAATCCCTGTGTGGCTCATTAG 2146
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2147 ACGACTATAAGCACAACCTGTATTTGTACCTTAATCTCTTACATTTCCACTGCTGTGTATCTGACATATCTACT 2220
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2221 AGTAAGCACTGTTTTGTCAAACCGTCTTTCTCTCCTTCATTTTACTGGTTCTTAGTCTCCTATCAATATAAGGA 2294
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2295 AATAAGAAGTGCCAGGGAGCCGCCATTGTGTGTTACGGTTTATATCGATAATCTTCAATATAAAATACTGGCCA 2368
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2369 TTTTATAAAATATTAAATATATGTAAATTCTTTGCATTTCATATTATTTGGGTCCCTTTATATGCCTAAATTAC 2442
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2443 ATCTTTAAGTTTCGGTTGCCATTGGAACATTGTGGAAACAATTCAGATTATATCAGTTTCCCATCCGCTTTTTA 2516
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2517 GCTGATTTCATTCTTTTCTGTTATTTTTTTGTCTAGTATGTTATACAGGGCAAGCCCTAGAAACGTTTCCTTTT 2590
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2591 GAGGAGCTTTCCAAGATTCCTTTTCCTCAGATGTTGTAGACAGAAGTTTATGTAGTTAATGGCATCTGGTGGAA 2664
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2665 GAGAACAGCTTTGTTTCCTCTTTAACTTTGGGAACACTAGAGGATGGTGTGGATAAAGATTGCCTGCAATAGAT 2738
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2739 GACTCCTTTTAAGCACTAGCCGTGAACAGATGAGCCTCCTCCACACCCCAGACACACACTGGGGAGAGATGAAG 2812
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2813 GTGATAAGCCACACTTCCGATTTACTCTAGAAGGGAAGACATTACTCTCTGTCATTAAACTAACTTAAAGCTTT 2886
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2887 TAGTGATTTACTTAGTACTTTTAGGAATACAAATAGGAATCTTTAGGATTTAAAAAGTTTTCCAATAATCTAGA 2960
Query 265 -------------------------------------------------------------------------- 264
Sbjct 2961 AGTTGGAAAAATAACAAAGAGTGGGCATGTTGGGGGAGGTTTTATTTTCTATCTTGCAGGCTCGAGTGCTTAGC 3034
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3035 TAAATGCTGGAAATGGACATAGGTGGAGAAATGGTCAGAGCAGCAGTGGGAGCGTACCCAGAACCATGAGTAGA 3108
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3109 CGGCAAGCGAGCTGCTCTGCCAAGCCAGGGATGGAGGTGTGAGGCGGCTGGTGTGGTAGAATATGTTGGAATCT 3182
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3183 AGTTAGAATTCCTGGATTGGAATCCTGTCACAGTTTGTTTCATCAGACAAATCACTTGCCCTTTTCTATTATTA 3256
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3257 TTATTTTTTTTTTTTTGAGAAAAAGTCTCACTGTTTTGCCCAGGCTGGGGTGCAGTGGTGCAATCTTGGCTCAC 3330
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3331 TGCAACCTCAGCCTCCCGAGTAGCCGGGATTACAGGTGCATGCCAACATGCCCAACTCATTTTTGTATTTTTAG 3404
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3405 TAGAGACGGGGTTTCACCATGTTGGCCAGGCTAGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCC 3478
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3479 TCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCCAGCCAATTCATGCCTCAATTTCTTTATCTCCGGA 3552
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3553 TTGAGGGATTTGTATTAGATTTTTTTTTTCCTAGTACCTTCCAGCTCTAAAAAAATTTGAAATAGCATAATAAA 3626
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3627 AGACAAAATGAAAACGAAATTTTAATTGTAATATTTTCTGTCACAGCAGCATATGTATATTTGAAATACTGGTA 3700
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3701 ACAATTTTAAGGTAGCATTCTGTGGTATTAATATTTATTAATATGCTCATGAACTTCTAAGTGCCACACCAGAC 3774
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3775 ATATAGACTCTTTACTTTAAAAGAGCATATATTTAAGGCATTGAAATGGATACAGCTATATTCATTCTCAATTG 3848
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3849 TCTTAGGCTATTATATGGAAAGATATGTGTCAATTATAGGTAGGTAGGTAGGTAGGTAGATTTTCTGGAAACAC 3922
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3923 AGAAGTACTTGACGGAGAGTTAGGCCTGTATTCTATAAATCTATTAATGGTAGCAAAGTGCATAAGACAGGGAT 3996
Query 265 -------------------------------------------------------------------------- 264
Sbjct 3997 TTCTTTGAGATGAAAGGAGTGCTGAAGAAGAGCATTGGAATTAATATTTGGATGTGGTATTGTGAAATTCAATG 4070
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4071 GGTAAAGTAACCCTAATGTGGGAATAAAAGTCAAGGGAAAGGTCTTGAATAAGTACACAGAAAAATAGGCTAAA 4144
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4145 AATATTAAGGGGAGGGAAATTGGAATACAGGGAGACAGTGTGCAAGAAAGCAAGCCAGGAATCTGCCTATGTGG 4218
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4219 TAGACCCAACCATTACTACTTGAACCCCCTTAGAAAAGCTTTTCCAGCATTCCATAACTCAGGTTCCTCATTTA 4292
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4293 TAAAGTGGGAAACTCATAATTGTCCTACCTACCTCACAGGGGTGTTGTGAGGATCAAAGGAACAGATGAATGTA 4366
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4367 TGAGCACTTTCAGACATGTAAGGCACTGTCATGTAACAAGTAGGGGAAAGACTCTGGAGCACATTAGTGCTGGT 4440
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4441 GTGTGCCAAGCCCGTGGGCTGTTGACCGTAAGGGATATTCAAGTAGGAGGAGGAAGAGAAGATGGCATTGCTAA 4514
Query 265 -------------------------------------------------------------------------- 264
Sbjct 4515 TAAAGGTTGTGATACACAACCATAGGATTAACTGCCTCCTCAAGTCCATCATGTAAATAAGGTGCTATGTATAC 4588
Query 265 ------------------------------------------------------------------------ 264
Sbjct 4589 CAACTTCTCACCACCTTTGTTTTTCTGTTCGGTAATCCTGGTGTGGACAAATAAAGTTTTCACTTGTATGTA 4660
