Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12027
- Subject:
- XM_006509867.3
- Aligned Length:
- 3381
- Identities:
- 1618
- Gaps:
- 1530
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTCCTGTTGGAGACTCATTCTGTTCCTGTCTGTCACCAGGTGGCTTTCAGATTACTCTGAAGCTCTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGCCTTTCTACTTCATATGCTGCTTTGCTCAGAATTAAGAAGAGTTCAACCTCACCCTTTGGTTCCAAGTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACCACGGTTCAGCAGTCCTTCATTAGGTACCATCAGTGTTTCTCCACCAAGCTGGCGAGGGGCAGCTCAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACCACTCCCCAGGCAACCTTTATCACTCCTCAGATGCCTTCAGACAAGATGAAAGTGTGGATTATGGGCCAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTGTGCAAGAACCTGATGATGTCATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCTCTAAATTGTGAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCGTGGCAACCCATCTCCTAGTTACAGATGGCTTCGGAATGGAACTGAAATAGCTCTGGAGAGTGACTATCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAGTCTGATAGACGGCACCTTCATCATCAGCAATCCAAGTGAACTCAGGGATTCTGGCCTGTACCAGTGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCCACCAACTCTTTTGGAAGTATTCTTAGTCGAGAAGCCACTCTTCAGTTTGCCTATCTGGGAAATTTTAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCGGACAAGAAGTGCAGTCTCAGTGCGGGAAGGCCAGGGGGTTGTTCTGATGTGCTCTCCACCACCACATTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGAGATCATCTATAGCTGGGTCTTCAATGAGTTCCCTTCCTTTGTGGCAGAGGACAGCCGGCGGTTCATATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAAGAGACAGGCAACCTTTATATTTCTAAAGTGCAAACATCCGATGTTGGCAGCTACATTTGTCTGGTGAAAA 814
Query 1 -----------------------------------------------------------------ATGGGAGAA 9
|||||||||
Sbjct 815 ATGCTGTGACAAATGCTCGCGTGCTCAGTCCTCCAACCCCACTCACGCTGCGAAATGATGGTGTGATGGGAGAA 888
Query 10 TATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGAATG 83
||||||||.||||||||||||||||||||||||||.||.|||||||||||.|||||||||||.|||||||||||
Sbjct 889 TATGAGCCAAAAATTGAGGTCCATTTTCCTTTCACTGTCACAGCTGCTAAGGGAACAACTGTGAAGATGGAATG 962
Query 84 CTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCACGTC 157
||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||.||||||||||||.|..|.|
Sbjct 963 CTTTGCACTTGGCAACCCGGTTCCAACAATTACTTGGATGAAGGTTAACGGTTACATTCCTAGTAAGTCCAGAC 1036
Query 158 TGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGAGCT 231
||||||||||.|||||.||||||||.||.||.||..|.||||||||||||||.||.||.||.||.||||.||||
Sbjct 1037 TGCGGAAATCCCAGGCAGTGCTGGAGATTCCAAACCTGCAGCTGGATGATGCCGGAATATACGAATGCACAGCT 1110
Query 232 GAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAAACT 305
||||||||.|||||||||||.||||||||||||||..|||||.|||.|||.|||||||||||||||.|.|||||
Sbjct 1111 GAAAACTCCCGTGGAAAAAACTCCTTTCGTGGACAGCTACAAATATTCACATACCCACACTGGGTACAGAAACT 1184
Query 306 GAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCACGT 379
|||||||||.|||.|.|||||||||||.|||||.|..||||||||.||||||||||||||.|||||||||||.|
Sbjct 1185 GAATGATACCCAGCTGGACAGTGGGAGTCCTCTGCAGTGGGAATGCAAGGCTACTGGAAAGCCCAGACCCACAT 1258
Query 380 ATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATGATC 453
|.||.||||||||||||||||.||||||||..||.|||||.||.||.||.|..||.||||||.|||||..||||
Sbjct 1259 ACCGCTGGCTGAAGAATGGAGCACCCCTCTTGCCGCAGAGCAGAGTGGACACAGTGAATGGAATATTGGCGATC 1332
Query 454 CACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGCTAG 527
||.|.|||||||||||||||||||||.||||||||||||||||||||.|||||.||||||||.|||||.||.||
Sbjct 1333 CAGAGTGTGAATCAATCAGATGCTGGGATGTATCAGTGTTTGGCTGAGAATAAATATGGAGCTATTTATGCGAG 1406
Query 528 TGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTACCA 601
||||||||||||||||||||||||..|.|||.|.||.|.||||||||||.||||||||.|.|||||||||||||
Sbjct 1407 TGCTGAGCTGAAGATTCTAGCTTCGCCGCCCTCCTTCGAACTGAATCAAGTGAAGAAATCCATAATTGTTACCA 1480
Query 602 AAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGAGAC 675
||||||..|.|||..|||||||||||.|||||||.||.||||||||.|||.|||||||.||||.|||.||||||
Sbjct 1481 AAGACCGGGGAGTGCTCATAGAGTGCGAACCCCAGGGATCTCCAAAGCCAGCCATCTCCTGGAGGAAGGGAGAC 1554
Query 676 AGAGCAGTTAG-----AGAAA--------------------------ACAAA---------------------- 696
|..|||||.|| |.||| |||||
Sbjct 1555 AAGGCAGTGAGGGCGAATAAAAGTGTATCCTTTTTCTCCACTGTGGTACAAAGAACTAGGGGGACTTGTGTGGT 1628
Query 697 ----------------------------------AGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAA 736
|||||||||||||||||||||||.||.||..|||||||||
Sbjct 1629 CATGAATGGCTGGGGACCTAAACTTGCAAGAAGGAGAATAGCTATTCTTCCAGACGGAAGCCTGAGGATCCTAA 1702
Query 737 ATGCTTCCAAATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCT 810
|.|||||.|||.||||.|||||.||||||.||||||.|||||..|||.||||.||||||||.||.|||||||||
Sbjct 1703 ACGCTTCTAAAGCAGATGAGGGGAAGTACATTTGCCAAGGGGTGAACATCTTCGGTTCTGCAGAGATTATAGCT 1776
Query 811 TCGCTATCTGTAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCAT 884
||.||.|||||.||||||||.|||||||||||.||||||||||||||||||||.||.||.||.|||||.|||||
Sbjct 1777 TCCCTGTCTGTCAAAGAACCCACAAGGATAGAGCTTACTCCTAAAAGAACAGAGTTAACTGTTGGAGAGAGCAT 1850
Query 885 TGTCCTTAATTGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTA 958
||||||.||.||.|||||.||.|||||.||.||||||||.|||||||||||||||||..|.||||||||.||||
Sbjct 1851 TGTCCTCAACTGTAAAGCTATCCACGACGCCAGTTTGGACGTCACTTTCTACTGGACATTAAAAGGACAACCTA 1924
Query 959 TTGATTTCGAGGAAGAGGGTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGATTTAATGATCAGG 1032
|||||||.|||.||||.||.|||||||||||||.|||||||||.||||||||||||||||||||||||||||||
Sbjct 1925 TTGATTTTGAGAAAGAAGGCGGACATTTTGAAAACATCAGGGCTCAAGCATCCTCTGCAGATTTAATGATCAGG 1998
Query 1033 AACATCCTTCTGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGC 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AACATCCTTCTGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGC 2072
Query 1107 AGAACTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGTACGGCCA 1180
||||||||||||||||||.||||||||.||||||||..|.||.||.||.|||||.||.||.|||||.||.||||
Sbjct 2073 AGAACTTCTTGTTAGGGGTCCCCCAGGGCCACCTGGAGTGGTCATAGTAGAGGAGATTACAGAAAGCACAGCCA 2146
Query 1181 CACTGTCCTGGAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT 1254
|.||.||.|||||.||||||.||||||||||.|||||.|||||.||.|||||||||||.|||||||||||.||.
Sbjct 2147 CTCTCTCATGGAGTCCAGCAACTGACAACCATAGCCCCATCTCTTCTTACAACCTTCAGGCTCGCAGCCCCTTC 2220
Query 1255 TCCCTGGGCTGGCAAACAGTAAAGACAGTCCCAGAAATCATAACAGGGGACATGGAGTCAGCCATGGCTGTGGA 1328
||||||||||||||||||||.|||||||||||||||.||||.|||||.||||||||||||||.|||||||||||
Sbjct 2221 TCCCTGGGCTGGCAAACAGTGAAGACAGTCCCAGAAGTCATCACAGGAGACATGGAGTCAGCAATGGCTGTGGA 2294
Query 1329 CCTAAATCCCTGGGTGGAATATGAATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCC 1402
||||||.||||||||.|||||||||||.||||||||.||||||||.||.||||||||||||||||||||||..|
Sbjct 2295 CCTAAACCCCTGGGTAGAATATGAATTCCGAGTGGTGGCCACCAATCCAATTGGGACAGGAGATCCAAGCATTC 2368
Query 1403 CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGA 1476
|||||||||||||||||||||||||.||||||||.|||||.|||||||.|||.||.||.|||||||||||||||
Sbjct 2369 CATCTCGAATGATCCGCACAAATGAGGCAGTTCCAAAGACGGCACCCAGCAACGTGAGTGGAAGAAGTGGAAGA 2442
Query 1477 AGGCATGAGTTAGTCATTGCCTGGGAGCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTATATTGT 1550
|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||
Sbjct 2443 AGGCATGAGTTGGTCATTGCCTGGGAGCCAGTATCAGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTACATAGT 2516
Query 1551 GGCTTTCAGACCCAATGGAACACGTGGCTGGAAGGAAAAAATGGTGACATCCTCTGAAGCTTCCAAATTCATTT 1624
|||.||||||||.|||||||||||||||||||||||.||||||||.||.||.||.||.||.|||||.|||||||
Sbjct 2517 GGCATTCAGACCTAATGGAACACGTGGCTGGAAGGAGAAAATGGTTACGTCTTCGGAGGCGTCCAAGTTCATTT 2590
Query 1625 ATCGAGATGAAAGTGTCCCTCCTCTTACTCCCTTTGAAGTGAAAGTTGGCGTTTATAACAATAAAGGAGATGGG 1698
|.|||||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.||||||||.||||||
Sbjct 2591 ACCGAGATGAAAGTGTCCCTCCTCTCACACCCTTTGAGGTCAAAGTTGGTGTTTATAATAATAAAGGTGATGGG 2664
Query 1699 CCTTTTAGTCAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAGATGTCAAGGCGAC 1772
|||||.||.||.||.||.|||||||||||||||||.||||||||||.||||||||||||.||.||||..||.||
Sbjct 2665 CCTTTCAGCCAGATCGTAGTCATCTGTTCAGCTGAGGGAGAACCCACTGCTGCTCCCACTGACGTCACAGCAAC 2738
Query 1773 AAGTGTGTCTGTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGTCTAGGAAGACCACAGGGATTTG 1846
.||||||||.||||||||||||.||||||.|||||||||..||||.||||||||.||||||||||||||.||||
Sbjct 2739 CAGTGTGTCAGTGTCAGAGATTTTTGTTGTATGGAAACATGTTAAGGAGAGTCTTGGAAGACCACAGGGGTTTG 2812
Query 1847 AGGTA--------------------------------------------------------------------- 1851
||.|.
Sbjct 2813 AGATTAGTTACTGGAAAGATACCGAGCCAGAAGACTCCGTAGAAACAGTCCGAACCAGAGGGAATGAGTCATTC 2886
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 2887 GTCATGTTGACGGGATTGGAAGGCAACACACTCTATCACCTCACAGTCAGGGCTTACAATGGAGCCGGCTATGG 2960
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 2961 GCCACCCAGCAGGGAAGCAAGCACCACCACAAAGAGGCACCCCCCTAGGGAGCCACCTGGCAACCTCCGGTGGG 3034
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 3035 AGCAGCAGGGCTCCCAAGTTTCCCTAGGCTGGGAGCCAGTCAGACCCCTAGCCAATGAGTCTGAAGTCATGGGT 3108
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 3109 TACAAGGTTTTTTATAGGCAAGAGGGTCACAGCGAAGGTCAAGTTATTGAGACACAGAAACCTCAAGCTGTAGT 3182
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 3183 GCCTCTACCTGAGGCTGGAGTCTACATTATTGAAGTTCGAGCGTACAGTGAGGGAGGAGATGGAACAGCTAGCT 3256
Query 1852 -------------------------------------------------------------------------- 1851
Sbjct 3257 CCCAAATCAGGGTTCCTTCATATTCAGGTGGGAAAATCACAAGCGCTCAGTCAACCCTGCACTCTCTCTCCAAG 3330
Query 1852 --------------------------------------------------- 1851
Sbjct 3331 TGGTCCTCAGTAACACTGCTCTTGGCTTTGATGCTTCCTTCCAGTTCCTGG 3381
