Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12029
Subject:
XR_001779566.1
Aligned Length:
2188
Identities:
834
Gaps:
1271

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTT  518

Query    1  ---------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGG  65
                     |||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.|||||||||||
Sbjct  519  GGAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGG  592

Query   66  AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGA  139
            |||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.||||
Sbjct  593  AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGA  666

Query  140  TCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCC  213
            |||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.||||||||||||||||||
Sbjct  667  TCAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCC  740

Query  214  TTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCC  287
            |||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||
Sbjct  741  TTTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCC  814

Query  288  CCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCA  361
            .||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct  815  TCCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCA  888

Query  362  AGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCG  435
            ||||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.
Sbjct  889  AGGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCA  962

Query  436  GTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTA  509
            |||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||  
Sbjct  963  GTGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC--  1034

Query  510  CACAATCCAGGGACAGTATGCCA----TCCCT-------------------CACCC---GGATTT---------  548
                  |||..||.|| .|||||    |||||                   |||||   ..||||         
Sbjct 1035  ------CCACCGAAAG-GTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTG  1101

Query  549  --------------GACCAAGCT-----CCACCAGTTGGCCA---------------TGCAGCAAAC-CCCCTT  587
                          |||| .|||     ||.|||.|  ||||               |||||||..| ||.||.
Sbjct 1102  GTCAGGTAAGAGCCGACC-CGCTCGCGGCCTCCACT--GCCAACCTCAGCCTTTTACTGCAGCATCCGCCGCTG  1172

Query  588  TCCTCC--------CCTCGGACAG---ACCAACCCCGCTTTCCCCG--GAGAAAAGCTGCCTTTACACTCCTCC  648
            .||.||        ||..||||||   .|||.||||   ..|||.|  ||||||||||||||||||||||||||
Sbjct 1173  CCCGCCTACACAATCCAGGGACAGTACGCCATCCCC---CACCCAGATGAGAAAAGCTGCCTTTACACTCCTCC  1243

Query  649  GAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCAC  722
            |||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1244  GAAGAAGCTCAAAATCTGATGGGCCAGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAGCTCAC  1317

Query  723  CATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTG  796
            |||||||||||||       ||||||||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1318  CATTCCCAATGAT-------GCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACAGATGTCTG  1384

Query  797  GAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCC  870
            ||||||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||||||.|||
Sbjct 1385  GAGCTCAGATCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCC  1458

Query  871  AACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCACGCTG---  939
            ||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||  ||||.||.   
Sbjct 1459  AACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCACTCTAACC  1532

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1533  TACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACT  1606

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1607  GCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAG  1680

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1681  GCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACGTATT  1754

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1755  CCCAAATGTGATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTTTGATGCTT  1828

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1829  TAACAGCACTTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATT  1902

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1903  TCCGCCCTAGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGA  1976

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1977  CTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTC  2050

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2051  GGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCT  2124

Query  940  ------------------------------------------  939
                                                      
Sbjct 2125  GCACCCATCAGAGTTTAATAAATGTCGTGTTCCTCCCCCATG  2166

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