Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12029
- Subject:
- XR_871720.2
- Aligned Length:
- 2188
- Identities:
- 840
- Gaps:
- 1264
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTT 518
Query 1 ---------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGG 65
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.|||||||||||
Sbjct 519 GGAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGG 592
Query 66 AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGA 139
|||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.||||
Sbjct 593 AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGA 666
Query 140 TCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCC 213
|||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.||||||||||||||||||
Sbjct 667 TCAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCC 740
Query 214 TTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCC 287
|||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||
Sbjct 741 TTTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCC 814
Query 288 CCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCA 361
.||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 815 TCCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCA 888
Query 362 AGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCG 435
||||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.
Sbjct 889 AGGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCA 962
Query 436 GTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTA 509
|||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||
Sbjct 963 GTGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC-- 1034
Query 510 CACAATCCAGGGACAGTATGCCA----TCCCT-------------------CACCC---GGATTT--------- 548
|||..||.|| .||||| ||||| ||||| ..||||
Sbjct 1035 ------CCACCGAAAG-GTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTG 1101
Query 549 --------------GACCAAGCT-----CCACCAGTTGGCCA---------------TGCAGCAAAC-CCCCTT 587
|||| .||| ||.|||.| |||| |||||||..| ||.||.
Sbjct 1102 GTCAGGTAAGAGCCGACC-CGCTCGCGGCCTCCACT--GCCAACCTCAGCCTTTTACTGCAGCATCCGCCGCTG 1172
Query 588 TCCTCC--------CCTCGGACAG---ACCAACCCCGCTTTCCCCG--GAGAAAAGCTGCCTTTACACTCCTCC 648
.||.|| ||..|||||| .|||.|||| ..|||.| ||||||||||||||||||||||||||
Sbjct 1173 CCCGCCTACACAATCCAGGGACAGTACGCCATCCCC---CACCCAGATGAGAAAAGCTGCCTTTACACTCCTCC 1243
Query 649 GAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCAC 722
|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1244 GAAGAAGCTCAAAATCTGATGGGCCAGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAGCTCAC 1317
Query 723 CATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTG 796
|||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1318 CATTCCCAATGATCTTATAGGCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACAGATGTCTG 1391
Query 797 GAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCC 870
||||||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||||||.|||
Sbjct 1392 GAGCTCAGATCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCC 1465
Query 871 AACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCACGCTG--- 939
||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||| ||||.||.
Sbjct 1466 AACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCACTCTAACC 1539
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1540 TACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACT 1613
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1614 GCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAG 1687
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1688 GCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACGTATT 1761
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1762 CCCAAATGTGATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTTTGATGCTT 1835
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1836 TAACAGCACTTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATT 1909
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1910 TCCGCCCTAGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGA 1983
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1984 CTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTC 2057
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2058 GGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCT 2131
Query 940 ------------------------------------------ 939
Sbjct 2132 GCACCCATCAGAGTTTAATAAATGTCGTGTTCCTCCCCCATG 2173
