Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12038
- Subject:
- NM_012447.4
- Aligned Length:
- 3675
- Identities:
- 218
- Gaps:
- 3438
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTCCCCGTTGCAAAGAGCTGTGGGAGATACCAAGAGGGCCTTGTCTGCATCTTCTAGTTCCTCTGCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTACCCTTTGATGACAGGGACTCAAACCATACCTCAGAGGGGAATGGCGACTCTTTGTTAGCTGATGAAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGACTTTGAAGACAGCTTGAATCGCAATGTGAAGAAGAGAGCAGCAAAACGACCACCGAAAACAACACCGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAAAACATCCAAAGAAAGGGTCCCGAGTGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTTTCAATGCTGTGAAAGCCGCCAAAAGTGACATGCAGTCTTTGGTAGATGAGTGGCTGGATAGCTACAAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGACCAGGATGCAGGATTTCTGGAGCTTGTTAACTTTTTCATCCAATCTTGCGGATGTAAAGGCATTGTGACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGAGATGTTCAAGAAGATGTCCAACTCAGAGATCATCCAGCACCTAACAGAGCAGTTTAATGAGGACTCGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGACTACCCTCTCATAGCTCCAGGTCCATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAATTTGTGAGGACAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTCTGTCAGTGCCAGTACAGCCTCCTCTATGATGGCTTCCCTATGGACGACCTCATCTCCCTGCTCACTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCTCAGACTCACAAGTCCGCGCCTTCCGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAAGTTGCCCTCCAACTGAGTGTGCACCAAGATAACAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGGGCAGAGGGCACCTGAGCGGCTGGAGAGCCTGTTGGAGAAACGCAAAGAGCTCCAAGAGCATCAAGAGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGAGGGGATGATGAATGCCCTCTTCAGGGGTGTCTTTGTTCATCGGTACAGGGATGTCCTTCCTGAGATCCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCCTGAAGTGTGTGAAGGCCCTGAAAGGGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACGGTAACCGGGACCTGACCACACGCCTGGAGCTCTTCACCAGCCGCTTCAAGGACCGGATGGTTTCCATGGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGGACAGAGAGTATGATGTGGCAGTGGAGGCTGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCTGACGGACGCGGATTGTGAGAGCGTCTACCCAGTTGTGTATGCCTCTCATCGAGGCCTGGCCTCTGCCGCA 1332
Query 1 ---------------------------------------------------ATGGGTGGAAGAGAGCAACGCCA 23
|||||||||||||||||||||||
Sbjct 1333 GGCGAATTTCTGTACTGGAAACTCTTCTACCCTGAGTGCGAGATAAGAATGATGGGTGGAAGAGAGCAACGCCA 1406
Query 24 GAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACG 97
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||
Sbjct 1407 GAGCCCAGGCGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCGAGCTCCATGACCACG 1480
Query 98 CTGCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTG 171
||||||||||||||||||..||||||||||||||||||.|||.|||||||||||||||||||||||||||||||
Sbjct 1481 CTGCTTACTTAGTAGACAGTCTGTGGGACTGTGCAGGGGCTCGGCTGAAGGACTGGGAGGGTCTGACAAGCCTG 1554
Query 172 CTGCTGGAGAAGGACCAGAGC-------ACGTGC-------CACA--------------TGGAGCCAGGGCCAG 217
|||||||||||||||||||.| |.|||| |||| ||...||||.|||.|
Sbjct 1555 CTGCTGGAGAAGGACCAGAACCTGGGTGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTCCAGTGCCCG 1628
Query 218 G-GACCTTC-------CA-CCTCCTAGGG--------------------------------------------- 237
| .|.|||| || ||.|||..||
Sbjct 1629 GCAAGCTTCAGAGGGGCACCCGCCTGTGGGCCGGGTCACTGGGAGGAAGGGCTTAACCTCTAAGGAGCGCAAGA 1702
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1703 CCCAAGCCGATGACAGGGTGAAGTTGACTGAGCACCTCATCCCCCTGCTGCCCCAGCTCCTGGCCAAGTTCTCA 1776
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1777 GCTGATGCAGAGAAGGTCACTCCCCTGCTCCAGCTTCTCAGCTGCTTTGACCTCCACATCTACTGCACTGGGCG 1850
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1851 CTTGGAGAAGCACCTGGAGCTGTTCCTGCAGCAACTCCAGGAGGTGGTGGTGAAGCATGCAGAGCCAGCGGTGC 1924
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1925 TTGAGGCTGGGGCGCATGCCCTCTACCTGCTCTGTAATCCCGAATTCACTTTCTTCAGCCGGGCGGACTTTGCC 1998
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1999 CGCAGCCAGCTAGTAGATTTGCTGACTGACCGCTTCCAGCAGGAGCTTGAAGAGCTGTTACAGTCGTCCTTCCT 2072
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2073 AGATGAGGATGAGGTATATAATCTGGCAGCCACTCTGAAACGCCTCTCTGCCTTCTACAACACTCATGACCTGA 2146
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2147 CTCGCTGGGAGCTCTATGAGCCATGTTGCCAACTCCTGCAGAAGGCTGTGGACACAGGAGAGGTTCCTCACCAG 2220
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2221 GTTATCCTGCCAGCCTTGACTCTTGTCTATTTTTCCATTCTCTGGACACTAACCCACATTTCTAAATCAGATGC 2294
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2295 TTCCCAGAAGCAGCTGTCGAGTTTGAGGGACAGAATGGTGGCCTTCTGTGAACTCTGCCAGAGTTGCCTCTCAG 2368
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2369 ATGTGGATACTGAGATCCAGGAGCAGGCTTTTGTCTTATTAAGTGATCTACTTCTCATCTTTAGCCCTCAGATG 2442
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2443 ATTGTTGGGGGCCGTGATTTCCTTAGGCCACTTGTCTTTTTTCCTGAAGCTACTCTCCAGTCTGAGCTAGCCAG 2516
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2517 CTTCCTCATGGACCACGTCTTCATCCAGCCGGGAGACCTGGGCAGTGGTGATTCCCAGGAGGATCATTTACAGA 2590
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2591 TAGAGCGGCTACACCAGCGGCGCCGCCTCCTAGCCGGGTTCTGCAAGCTGTTGCTTTATGGGGTGCTGGAGATG 2664
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2665 GATGCAGCCTCAGATGTTTTCAAACACTACAACAAGTTCTACAATGACTATGGTGACATTATCAAGGAAACATT 2738
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2739 AACTAGAGCAAGGCAGATTGACCGAAGTCATTGTTCCCGAATCCTGCTGCTGAGCCTCAAGCAGCTGTACACAG 2812
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2813 AACTGCTGCAGGAGCATGGGCCCCAGGGCCTGAATGAGCTTCCTGCCTTCATCGAGATGAGGGACCTGGCCCGG 2886
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2887 AGGTTTGCCTTGAGTTTTGGACCCCAGCAGCTGCAGAACCGTGACCTCGTGGTCATGCTACACAAGGAAGGCAT 2960
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2961 CCAGTTCTCCTTGTCTGAGCTTCCTCCAGCTGGCTCCTCCAATCAGCCTCCAAATCTGGCATTCCTGGAGCTCC 3034
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3035 TTTCAGAGTTTTCCCCCCGACTCTTCCATCAGGACAAGCAGCTTTTACTGTCCTATCTAGAAAAGTGCCTGCAG 3108
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3109 CATGTCTCCCAGGCACCTGGCCATCCCTGGGGCCCAGTCACCACCTACTGCCACTCCCTCAGCCCTGTGGAGAA 3182
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3183 CACAGCAGAGACCAGCCCTCAGGTCCTCCCCAGCTCCAAGAGGAGGCGCGTTGAAGGGCCTGCCAAGCCTAACA 3256
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3257 GAGAGGACGTCTCCTCGTCCCAGGAAGAAAGTCTGCAGCTGAACAGCATCCCGCCCACGCCCACCCTCACCTCC 3330
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3331 ACAGCTGTGAAGAGCAGGCAGCCCCTGTGGGGGTTGAAAGAGATGGAGGAAGAAGATGGCTCAGAGTTGGATTT 3404
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3405 TGCCCAGGGTCAGCCCGTCGCAGGCACCGAGAGGTCAAGGTTCTTGGGTCCACAATATTTCCAGACTCCACACA 3478
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3479 ACCCTTCAGGTCCTGGCCTGGGCAACCAGCTGATGCGACTCAGCCTTATGGAAGAGGACGAGGAAGAAGAGTTA 3552
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3553 GAAATCCAGGATGAGTCAAATGAAGAACGGCAGGATACAGACATGCAAGCAAGTAGCTACTCTTCCACCAGTGA 3626
Query 238 ------------------------------------------------- 237
Sbjct 3627 GCGCGGGCTGGACCTCTTAGATTCTACAGAGCTGGATATTGAGGATTTC 3675
