Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12064
• Subject: NM_001161407.1
• Aligned Length: 1008
• Identities: 666
• Gaps: 342

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCACGCCGGCGGAGCCAGCGAGTCTGCGCGAGCGGTCCGAGCATGCTCAATAGCGCGCGCGGCGCCCCGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTTCTCCGCGGAACCGCGACCAACGCGGAGGTCTCGGCGGCCGCTGCGGGAGCCACAGGAAGTGAAGAGCTTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCCGGGAGACCGCGGCTGCAGGAACGGAGGCGGAAGGGGCCCTGCGGCGACGACGTCGTCGACGGGGGTGGCC  222

Query    1  ------------------------------------------------------------ATGGATCACCACCA  14
                                                                        ||||||||||||||
Sbjct  223  GTGGGAGCTGAGCACGGAGAAGACTCCCTCTCTCGGAAGCCGGATCCCGAGCCGGGCAGGATGGATCACCACCA  296

Query   15  GCCGGGGACTGGGCGCTACCAGGTGCTTCTTAATGAAGAGGATAACTCAGAATCATCGGCTATAGAGCAGCCAC  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCGGGGACTGGGCGCTACCAGGTGCTTCTTAATGAAGAGGATAACTCAGAATCATCGGCTATAGAGCAGCCAC  370

Query   89  CTACTTCAAACCCAGCACCGCAGATTGTGCAGGCTGCGTCTTCAGCACCAGCACTTGAAACTGACTCTTCCCCT  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTACTTCAAACCCAGCACCGCAGATTGTGCAGGCTGCGTCTTCAGCACCAGCACTTGAAACTGACTCTTCCCCT  444

Query  163  CCACCATATAGTAGTATTACTGTGGAAGTACCTACAACTTCAGATACAGAAGTTTACGGTGAGTTTTATCCCGT  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCACCATATAGTAGTATTACTGTGGAAGTACCTACAACTTCAGATACAGAAGTTTACGGTGAGTTTTATCCCGT  518

Query  237  GCCACCTCCCTATAGCGTTGCTACCTCTCTTCCTACATACGATGAAGCTGAGAAGGCTAAAGCTGCTGCAATGG  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCACCTCCCTATAGCGTTGCTACCTCTCTTCCTACATACGATGAAGCTGAGAAGGCTAAAGCTGCTGCAATGG  592

Query  311  CAGCTGCAGCAGCAGAAACATCTCAAAGAATTCAGGAGGAAGAGTGTCCACCAAGAGATGACTTCAGTGATGCA  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGCTGCAGCAGCAGAAACATCTCAAAGAATTCAGGAGGAAGAGTGTCCACCAAGAGATGACTTCAGTGATGCA  666

Query  385  GACCAGCTCAGAGTGGGGAATGATGGCATTTTCATGCTGGCATTTTTCATGGCATTTATTTTCAACTGGCTTGG  458
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct  667  GACCAGCTCAGAGTGGGGAATGATGGCATTTTCATGCTGGCATTTTTCA-------------------------  715

Query  459  ATTTTGTTTATCCTTCTGTATCACCAATACCATAGCTGGAAGGTATGGTGCTATCTGCGGATTTGGCCTTTCCT  532
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  716  -----------------------------------CTGGAAGGTATGGTGCTATCTGCGGATTTGGCCTTTCCT  754

Query  533  TGATCAAATGGATCCTTATTGTCAGGTTTTCTGATTATTTTACTGGATATTTCAATGGACAGTATTGGCTTTGG  606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  755  TGATCAAATGGATCCTTATTGTCAGGTTTTCTGATTATTTTACTGGATATTTCAATGGACAGTATTGGCTTTGG  828

Query  607  TGGATATTTCTTGTACTTGGCCTGCTCCTTTTCTTCAGAGGATTTGTTAATTATCTAAAAGTCAGAAACATGTC  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  829  TGGATATTTCTTGTACTTGGCCTGCTCCTTTTCTTCAGAGGATTTGTTAATTATCTAAAAGTCAGAAACATGTC  902

Query  681  TGAAAGTATGGCAGCTGCTCATAGAACAAGGTATTTCTTCTTATTG  726
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  903  TGAAAGTATGGCAGCTGCTCATAGAACAAGGTATTTCTTCTTATTG  948