Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12085
• Subject: NM_001312691.1
• Aligned Length: 1401
• Identities: 894
• Gaps: 507

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGATCGTCAGCGCTGACTCCATGCAGGTCTATGAAGGCCTAGACATCATCACCAACAAGGTTTCTGCCCAAGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGAGAATCTGCCGGCACCACATGATCAGCTTTGTGGATCCTCTTGTGACCAATTACACAGTGGTGGACTTCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAATAGAGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAACCAATT  370

Query    1  -----------------------------------------------------ATGGGCACTGAGAAAGTGATT  21
                                                                 |||||||||||||||||||||
Sbjct  371  ATTACATTGAATCTCTGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGAGAAAGTGATT  444

Query   22  GACCGAAAAGTGGAGCTTGAAAAGGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCAGGTGGACCCAGAAAT  95
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACCGAAAAGTGGAGCTTGAAAAGGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCAGGTGGACCCAGAAAT  518

Query   96  GGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACAGGAATCT  169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACAGGAATCT  592

Query  170  CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCT  243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCT  666

Query  244  AACCCTTGCATCCTTTGGCTTCATGCTGACCAGGC------AGATGAGCGCTTGGATAAGAGGGTGGATGACAT  311
            |||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||
Sbjct  667  AACCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACAT  740

Query  312  GCTTGCTGCTGGGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATA  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCTTGCTGCTGGGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATA  814

Query  386  GCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGA  459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGA  888

Query  460  AAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATA  533
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct  889  AAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAG----------------------------------  928

Query  534  TGCCCGGAAACAAAACCGATGGGTTAAAAACCGTTTTTTGAGCAGACCTGGTCCCATTGTCCCCCCTGTCTATG  607
                                                        ||||||||||||||||||||||||||||||
Sbjct  929  --------------------------------------------GACCTGGTCCCATTGTCCCCCCTGTCTATG  958

Query  608  GCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTC  681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  GCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTC  1032

Query  682  ATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCA  755
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  ATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCA  1106

Query  756  CCTGTGTGACCTCTGTGATCGAATCATCATTGGGGATCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACT  829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107  CCTGTGTGACCTCTGTGATCGAATCATCATTGGGGATCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACT  1180

Query  830  TGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAACACCATAGAAAGTCAGAGTGTTTCCCCA  903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181  TGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAACACCATAGAAAGTCAGAGTGTTTCCCCA  1254

Query  904  GACCATAACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTT  972
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255  GACCATAACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTT  1323