Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12179
- Subject:
- NM_001367611.1
- Aligned Length:
- 2274
- Identities:
- 738
- Gaps:
- 1533
Alignment
Query 1 ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCACTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA 74
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA 74
Query 75 AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA 148
Query 149 GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG 222
Query 223 CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGCGACAAAGGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 223 CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGTGACAAAGGT 296
Query 297 GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT 370
Query 371 CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC 444
Query 445 AGCTGGAATGTTAACCTTAGAAAGTTT----------------------------------------------- 471
|||||||||||||||||||||||||||
Sbjct 445 AGCTGGAATGTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTC 518
Query 472 ---------------------CCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGG 524
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TAGACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGG 592
Query 525 AGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCC 666
Query 599 TTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGG 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGG 740
Query 673 AGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGCGTGGTGTG----- 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 741 AGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGG 814
Query 742 -------------------------------------------------------------------------- 741
Sbjct 815 CCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGT 888
Query 742 -------------------------------------------------------------------------- 741
Sbjct 889 ACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTG 962
Query 742 -------------------------------------------------------------------------- 741
Sbjct 963 CAGTGGGGATAAAGCCCCTCCTCCGCCCACTCAGAAAGGGGGGACCATTTCCTGCTACAGATGTGGTCGCTGGA 1036
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1037 ATCTCTGGGAGGCGTCCTTCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTGCTGGCTGTTCTGTTTGCCCT 1110
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1111 AAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGTGAAGTCCCTAGTGAA 1184
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1185 ACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCCCCGATGTGCCTGGC 1258
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1259 AGTCCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC 1332
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1333 TTCTACCCATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAACTAGCCTCTCAAAAGCAGAGGCAGGAGAAAAT 1406
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1407 GAGTGACCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCT 1480
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1481 CTGCTCACCTCAGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG 1554
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1555 CTTATCTCTGCTACTGTCCACGAAGATGGTTGTGAAGTTAGCATCAGACTGAATTATAGTCAAGTCTCAAACAA 1628
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1629 GAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCGAGGGTGATGGGGGGC 1702
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1703 TGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACTACAGCCAGAGTACCTCAGATACTATTGAAAAAATCAAAAGG 1776
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1777 ATAAAGAATTTCAAGACCAAAACTTTTCAAGAAAAGAAGGAGCAGCTTATACCTGAAAACAGACTCCTGCTGAA 1850
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1851 GGAAGTCGGACCCACGGGGGAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACT 1924
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1925 GCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC 1998
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1999 GTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT 2072
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2073 TGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGAG 2146
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2147 GCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGC 2220
Query 742 ------------------------------------------------------ 741
Sbjct 2221 CAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGCCTGGATGACTGT 2274
