Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12179
Subject:
NM_001367611.1
Aligned Length:
2274
Identities:
738
Gaps:
1533

Alignment

Query    1  ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCACTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA  74
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA  74

Query   75  AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA  148

Query  149  GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG  222

Query  223  CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGCGACAAAGGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  223  CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGTGACAAAGGT  296

Query  297  GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT  370

Query  371  CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC  444

Query  445  AGCTGGAATGTTAACCTTAGAAAGTTT-----------------------------------------------  471
            |||||||||||||||||||||||||||                                               
Sbjct  445  AGCTGGAATGTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTC  518

Query  472  ---------------------CCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGG  524
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAGACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGG  592

Query  525  AGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCC  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCC  666

Query  599  TTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGG  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGG  740

Query  673  AGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGCGTGGTGTG-----  741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||     
Sbjct  741  AGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGG  814

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  815  CCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGT  888

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  889  ACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTG  962

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  963  CAGTGGGGATAAAGCCCCTCCTCCGCCCACTCAGAAAGGGGGGACCATTTCCTGCTACAGATGTGGTCGCTGGA  1036

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1037  ATCTCTGGGAGGCGTCCTTCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTGCTGGCTGTTCTGTTTGCCCT  1110

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1111  AAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGTGAAGTCCCTAGTGAA  1184

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1185  ACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCCCCGATGTGCCTGGC  1258

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1259  AGTCCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC  1332

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1333  TTCTACCCATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAACTAGCCTCTCAAAAGCAGAGGCAGGAGAAAAT  1406

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1407  GAGTGACCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCT  1480

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1481  CTGCTCACCTCAGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG  1554

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1555  CTTATCTCTGCTACTGTCCACGAAGATGGTTGTGAAGTTAGCATCAGACTGAATTATAGTCAAGTCTCAAACAA  1628

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1629  GAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCGAGGGTGATGGGGGGC  1702

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1703  TGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACTACAGCCAGAGTACCTCAGATACTATTGAAAAAATCAAAAGG  1776

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1777  ATAAAGAATTTCAAGACCAAAACTTTTCAAGAAAAGAAGGAGCAGCTTATACCTGAAAACAGACTCCTGCTGAA  1850

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1851  GGAAGTCGGACCCACGGGGGAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACT  1924

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1925  GCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC  1998

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1999  GTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT  2072

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 2073  TGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGAG  2146

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 2147  GCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGC  2220

Query  742  ------------------------------------------------------  741
                                                                  
Sbjct 2221  CAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGCCTGGATGACTGT  2274

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