Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12179
- Subject:
- NM_001367613.1
- Aligned Length:
- 2289
- Identities:
- 738
- Gaps:
- 1548
Alignment
Query 1 ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCACTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA 74
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGA 74
Query 75 AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCA 148
Query 149 GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTG 222
Query 223 CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGCGACAAAGGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 223 CCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGTGACAAAGGT 296
Query 297 GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTT 370
Query 371 CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGC 444
Query 445 AGCTGGAATGTTAACCTTAGAAAGTTT----------------------------------------------- 471
|||||||||||||||||||||||||||
Sbjct 445 AGCTGGAATGTTAACCTTAGAAAGTTTCCAGATCTTCACTTTTCAGAGAGTCCATTGGAAATCCCAGCTTATGG 518
Query 472 ------------------------------------CCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGT 509
||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGT 592
Query 510 GTTTGACAAGCACGGAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCC 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTTTGACAAGCACGGAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCC 666
Query 584 CGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCT 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCT 740
Query 658 CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCT 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCT 814
Query 732 GCGTGGTGTG---------------------------------------------------------------- 741
|.||||||||
Sbjct 815 GTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGTAATT 888
Query 742 -------------------------------------------------------------------------- 741
Sbjct 889 TGCCGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATC 962
Query 742 -------------------------------------------------------------------------- 741
Sbjct 963 ACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCCCACTCAGAAAGGGGGGACCATTTCCTGCTACA 1036
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1037 GATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTTCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTGCTGGC 1110
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1111 TGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGT 1184
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1185 GAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGC 1258
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1259 CCCGATGTGCCTGGCAGTCCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACA 1332
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1333 CAGACTGTTGGCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAACTAGCCTCTCAAAAGCA 1406
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1407 GAGGCAGGAGAAAATGAGTGACCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGAC 1480
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1481 AGCTGGATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAA 1554
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1555 CCCAGGATGGGAAAGCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGAAGTTAGCATCAGACTGAATTATAG 1628
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1629 TCAAGTCTCAAACAAGAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCG 1702
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1703 AGGGTGATGGGGGGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACTACAGCCAGAGTACCTCAGATACTATT 1776
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1777 GAAAAAATCAAAAGGATAAAGAATTTCAAGACCAAAACTTTTCAAGAAAAGAAGGAGCAGCTTATACCTGAAAA 1850
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1851 CAGACTCCTGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGG 1924
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1925 GAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAA 1998
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1999 GCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACAGCTCTTCA 2072
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2073 TGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAA 2146
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2147 AGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTT 2220
Query 742 --------------------------------------------------------------------- 741
Sbjct 2221 GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGCCTGGATGACTGT 2289
