Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12190
- Subject:
- NR_024487.2
- Aligned Length:
- 2671
- Identities:
- 500
- Gaps:
- 2110
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGAGGGATGTGAGAGGCCAGGCCGGGGTGTGTGTAGAGGAAGAACGTGAGCCCTTGTGACGCGCAGCAGCGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAAGACCGGCGAGGAGTCTCGCGTCCTGGAACCTCATTCAGATCCACGGCAGGAAAACCGCGGGTGCGCAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAAAACTACGCCTGCGCCGCCTCCAGAGCCTGACTACCTTTAGCAAGGGGACAGCGGCTGAGTGGGTGGTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAATCGGGATTCCGGAAGCCCACCTTTCACCCGGAAATGATTGTGGAGGAACATGGCGTTGCTGGTGCGAGTCC 296
Query 1 -------------------------------------ATGCAGCCGATTGATACCTGTGTCTCCTACCCAAGGA 37
||||||||.|.||.||.|.|||||||||||||||.||
Sbjct 297 TTAGGAACCAGACTAGCATCTCTCAGTGGGTTCCAGTATGCAGCCAACTGGTATCAGTGTCTCCTACCCAAAGA 370
Query 38 CAGGGGGACAG-----------GGC----------TCTGTCTCG------------------------------ 60
|||.||..||| ||| ||.||||||
Sbjct 371 CAGTGGAGCAGCACTTCCCAGTGGCTCCAGAAGAATCAGTCTCGAGTGTGTTTGGGATCAGAACAGACTGTTGG 444
Query 61 ------CAC-------------------------------------------------------TTCCCA---- 69
||| ||||||
Sbjct 445 AGCGGACACAGCGCAGAATAGGAAATACCACAACACAAGTAAGTAGCTTCTTACTACCCAAGATTTCCCACAGC 518
Query 70 -------------------------------------------------------------------------- 69
Sbjct 519 CTGTTGAAGAGAAGGTCGGTCCCTTCACGAAGATAATAGAAGCCATGGGATTCACTGGACCTTTGAAATACAGT 592
Query 70 -------------------------------------------------------------------------- 69
Sbjct 593 AAATGGAAGATCAAGATCGCGGCCCTCCGCATGTACACGAGCTGCGTGGAGAAGACTGACTTCGAGGAGTTCTT 666
Query 70 ----GGGTGTCAGATGCCTGATACATTCAATTCATGGTTTCTTATAACCCTACTCCACGTCTGGATGTGTCTAG 139
.|||||||||||||.|||||||||||.||.||||||||.||||||||.||.||.||||||||||||||||
Sbjct 667 TCTGAGGTGTCAGATGCCCGATACATTCAACTCCTGGTTTCTCATAACCCTGCTTCATGTCTGGATGTGTCTAG 740
Query 140 TCCGAATGAAGCAGGAAGGCCGGAGTGGGAAGTACATGTGTCGTATCATAGTTCATTTTATGTGGGAGGATGTT 213
||||||||||||||||||||||||.|||||||||||||||.||.||||||||||||||.||||||||.|||||.
Sbjct 741 TCCGAATGAAGCAGGAAGGCCGGACTGGGAAGTACATGTGCCGGATCATAGTTCATTTCATGTGGGAAGATGTG 814
Query 214 CAGCAGCGCGGCAGAGTCATGGGGGTTAATCCCTATATCCTGAAGAAGAACATGATCCTCATGACAAATCATTT 287
.|||||||||||.|.|||||||||||||||.||||||||||.||||||||||||..|||||||||.||..||||
Sbjct 815 GAGCAGCGCGGCCGCGTCATGGGGGTTAATTCCTATATCCTAAAGAAGAACATGGCCCTCATGACGAACAATTT 888
Query 288 CTATGCAGCGATCTTGGGATATGATGAGGGGATCCTTTCAGATGATCATGGGCTGGCCGCTGCCCTCTGGAGAA 361
|||||||||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.|||||.||||||||.|
Sbjct 889 CTATGCAGCAATCTTGGGATACGATGAGGGGATCCTTTCAGATGACCATGGCCTGGCTGCTGCGCTCTGGAGGA 962
Query 362 CCTTCTTCAACCGGAAATGTGAAGACCCTCGACATCTTGAATTGCTGGTAGAGTATGTGAGGAAACAGATACAG 435
||||||||||||.|||||||||.|||||||||||.||||||||||||||.||.|||||||||||||||||.||.
Sbjct 963 CCTTCTTCAACCAGAAATGTGAGGACCCTCGACAGCTTGAATTGCTGGTGGAATATGTGAGGAAACAGATGCAA 1036
Query 436 TACCTGGACTCCATGAACGGGGAGGATCTGCTTCTGACAGGGGAGGTGAGCTGGCGCCCTCTAGTGGAGAAGAA 509
||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||||||||.|||||||||||
Sbjct 1037 TACCTGGACTCCATGAACGGTGAGGATCTGCTGCTGACAGGGGAAGTGAGATGGCGCCCTCTGGTGGAGAAGAA 1110
Query 510 TCCTCAGAGCATCCTGAAGCCCCATTCTCCGACTTACAACGACGAGGGACTT---------------------- 561
|||.||.||||||.|||||||||||.||||.||||||||.||.|||||.|||
Sbjct 1111 TCCACAAAGCATCTTGAAGCCCCATGCTCCTACTTACAATGATGAGGGCCTTTGAGAGACTGGTCCCTCCGGAC 1184
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1185 AGCTGGCTGGCTGGCTTTGAGGACCTTCCATGGAAGAAGTGCCTGTTTGCCCCAGGACCCTGAAGAAGGTGGCC 1258
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1259 TGAACTGACTTGTGAACAGTACCTGTTGAATACTCAGCCCACTCGTGTTGAGTTTCTTCTTCCTGATCTGGTGG 1332
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1333 GGTTACTGGGGAGGTCCTCTTGCTCTTTGACAGGTCCCCTCCCTCAAGAGAAGCCCCAGGCACACTTCCCAAGT 1406
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1407 CCCCTCAGCACCACACGTGACTGAGAGCTTTTTCCGAAGGCTGAGGAAGGGATGGGTAGGTTAGAAGGGGGTGC 1480
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1481 CTTCACTCAGAAACCCCTGTGCTTGGAGCAGTTTATTAAGTTCCAAAGTCACAGTGGGTAACCATATACTGTTC 1554
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1555 CCCCTCTGTGAGCCATGGGGTTGAAGTAGCCATTAAAAAGAGAGACTTATTTCTGCCATGGTTTTTCTTTGTTC 1628
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1629 CAAGGTCTTTTAGAAACATAGTTAAAGCCCAGTGTAGTGGTGCATGTCTTTAGTCCAAGTATTTGGGAAGCAGA 1702
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1703 GGCAGATGACTCTAGCTAGGTTCTAGGTCAGCATGATCTACAGAGTGAATTACAGGGCAGGCAGAGCTACACAG 1776
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1777 AGAAAGCCTGTCTTGAAAAAACAAGAGAAAAGAAAAGTGCAGGTGAGGCCGTGGGTTCTCCAAGCTCAGGGAAT 1850
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1851 AACTGCAGCTCAGTTAGAGGCAGCACGGAGAGGAGCGGAGAGGAGAGGAGAGGAGAAGAGGCCAGGGGCTCTCT 1924
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1925 GCTGCTACTCCTGTCCCCAGGTCACAGAGAGGAGTCACTGTCTGGGCAAGGTACAGTCTGCCAGGCATGTTCAC 1998
Query 562 -------------------------------------------------------------------------- 561
Sbjct 1999 TGAGATCCAGGAGGTCTCAGGACCAAGGGGCTTGTCACATCCTAAGTCATTTAGAAAGAACAAAAGTCCCTTTG 2072
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2073 TCACCCACAGTGAACTGGGGAAGGAACACACTCTCCGCACTTGGCCTCTCTTTACGTGAGATACTGTGGCGTGC 2146
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2147 TGGTACCATCCAAGCCTCGGCCCGGTGTCTATCCCCTCCCCAAGTTCTAAAGCACGGGCTGTGATGGGAACTTG 2220
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2221 AGGGGCCTTTTCTCTCTGGGCACTTGAAGGGTCTGTTCTCTCTCCCCCGAGACTTTGGGTCATCTCTTGGAAGG 2294
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2295 TTTTCTGAAATTGAGGAACGGGGGTGGGGCCCGTCTCCTCCCTCCCTTCCCCCACCCAGCTTCCTTCATTGAAC 2368
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2369 TTGCTATAAAATGAGTCATATGAAGAAACCCTATACTGTGAGGTATGCGCCACTTCTGTGAAAACATTACAAAT 2442
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2443 CAAGCCGCCTTCTCAGTTTATTTAAGATGCTTTTGTTGCAAGCGGGGCTCTGGAGTGAGGCGTCCTCTGTGAGC 2516
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2517 ATGAGATAATAGCACCTTGTAACTCATTACATCTGGGCACTATTTACATAAACCAGAGGCGAGCCAGGCAGGGA 2590
Query 562 -------------------------------------------------------------------------- 561
Sbjct 2591 TTTGCTGATTAATTTATTTTTAATGGACTGAAGTATGCCATGCACCAAAATAAACTTTACTGTGTGTACCTAAC 2664
Query 562 ------- 561
Sbjct 2665 TGCTCCT 2671
