Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12211
- Subject:
- XR_002957033.1
- Aligned Length:
- 1922
- Identities:
- 994
- Gaps:
- 926
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGTGCCGGGCGCCCAGGGGTTGCCGCGCTGGGCGGGAGGGCAGCGCCTGAGAGGGCGGTGGGGTGGCGGGGTT 74
Query 1 -----------------------------------------------------ATGGGCATCTACCAGATGTAC 21
|||||||||||||||||||||
Sbjct 75 CCTGCGCGCGGCCCGCCATGGAGGTGGAGGAGGCGTTCCAGGCGGTGGGGGAGATGGGCATCTACCAGATGTAC 148
Query 22 TTGTGCTTCCTGCTGGCCGTGCTGCTGCAGCTCTACGTGGCCACGGAGGCCATCCTCATTGCACTGGTTGGGGC 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGTGCTTCCTGCTGGCCGTGCTGCTGCAGCTCTACGTGGCCACGGAGGCCATCCTCATTGCACTGGTTGGGGC 222
Query 96 CACGCCATCCTACCACTGGGACCTGGCAGAGCTCCTGCCAAATCAGAGCCACGGTAACCAGTCAGCTGGTGAAG 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CACGCCATCCTACCACTGGGACCTGGCAGAGCTCCTGCCAAATCAGAGCCACGGTAACCAGTCAGCTGGTGAAG 296
Query 170 ACCAGGCCTTTGGGGACTGGCTCCTGACAGCCAACGGCAGTGAGATCCATAAGCACGTGCATTTCAGCAGCAGC 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCAGGCCTTTGGGGACTGGCTCCTGACAGCCAACGGCAGTGAGATCCATAAGCACGTGCATTTCAGCAGCAGC 370
Query 244 TTCACCTCCATCGCCTCGGAGTGGTTTTTAATTGCCAACAGATCCTACAAAGTCAGTGCAGCAAGCTCTTTTTT 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCACCTCCATCGCCTCGGAGTGGTTTTTAATTGCCAACAGATCCTACAAAGTCAGTGCAGCAAGCTCTTTTTT 444
Query 318 CTTCAGTGGTGTATTTGTTGGAGTTATCTCTTTTGGTCAGCTTTCAGATCGCTTCGGAAGGAAAAAAGTCTATC 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCAGTGGTGTATTTGTTGGAGTTATCTCTTTTGGTCAGCTTTCAGATCGCTTCGGAAGGAAAAAAGTCTATC 518
Query 392 TCACAGGTTTTGCTCTTGACATCTTATTTGCAATTGCAAATGGATTTTCCCCCTCATATGAGTTCTTTGCAGTA 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCACAGGTTTTGCTCTTGACATCTTATTTGCAATTGCAAATGGATTTTCCCCCTCATATGAGTTCTTTGCAGTA 592
Query 466 ACTCGCTTCCTGGTGGGCATGATGAATGGAGGGATGTCGCTGGTGGCCTTTGTCTTGCTTAATGAGTGTGTGGG 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 593 ACTCGCTTCCTGGTGGGCATGATGAATGGAGGGATGTCGCTGGTGGCCTTTGTCTTGCTTAATGAATGTGTGGG 666
Query 540 CACCGCCTACTGGGCACTTGCAGGATCGATTGGCGGCCTCTTCTTTGCAGTTGGCATTGCCCAATATGCCCTGT 613
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 667 CACCGCCTACTGGGCACTTGCAGGATCGATTGGCGGCCTGTTCTTTGCAGTTGGCATTGCCCAATATGCCCTGT 740
Query 614 TAGGATACTTCATCCGCTCCTGGAGGACCCTAGCCATTCTGGTTAACCTGCAGGGAACGGTGGTCTTTCTCTTA 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAGGATACTTCATCCGCTCCTGGAGGACCCTAGCCATTCTGGTTAACCTGCAGGGAACGGTGGTCTTTCTCTTA 814
Query 688 TCTTTATTCATTCCTGAATCACCTCGTTGGTTATACTCCCAGGGTCGACTGAGTGAGGCTGAAGAGGCGCTGTA 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCTTTATTCATTCCTGAATCACCTCGTTGGTTATACTCCCAGGGTCGACTGAGTGAGGCTGAAGAGGCGCTGTA 888
Query 762 CCTCATTGCCAAGAGGAACCGCAAACTCAAGTGCACGTTCTCACTAACACACCCAGCCAACAGGAGCTGCAGGG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTCATTGCCAAGAGGAACCGCAAACTCAAGTGCACGTTCTCACTAACACACCCAGCCAACAGGAGCTGCAGGG 962
Query 836 AGACTGGAAGTTTCCTGGATCTCTTTCGTTACCGGGTCCTGTTAGGACACACTTTGATCCTGATGTTCATC--- 906
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGACTGGAAGTTTCCTGGATCTCTTTCGTTACCGGGTCCTGTTAGGACACACTTTGATCCTGATGTTCATCTGC 1036
Query 907 -------------------------------------------------------------------------- 906
Sbjct 1037 AAGTCTCCTGATCCTTAGCGCCTGGTTTTCTGCTTGCGCAGCCCCGTCTTTCTCAAGTAGCAGATGATAGTGCC 1110
Query 907 -------------------------------------------------------------------------- 906
Sbjct 1111 TGATGGGCAGGTCCACTGAGCTTGAATACCTGGGAGACAGTGAGAACAGACAATGCAGTGTCACCTTGCATCCT 1184
Query 907 ---------------------------------------TGGTTTGTGTGCAGCTTGGTGTATTATGGCCTAAC 941
|||||||||||||||||||||||||||||||||||
Sbjct 1185 TACATGTGATGTCCTGGCTACAATCCTGCCCGTTGTCCTTGGTTTGTGTGCAGCTTGGTGTATTATGGCCTAAC 1258
Query 942 TCTGAGTGCGGGTGATCTAGGTGGAAGTATTTATGCCAACCTGGCCCTGTCTGGCCTCATAGAGATTCAATCTT 1015
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTGAGTGCGGGTGATCTAGGTGGAAGTATTTATGCCAACCTGGCCCTGTCTGGC------------------- 1313
Query 1016 ACCCTCTCTGTATCTACTTGATTAACCAAAAATGGTTTGGTCGGAAGCGAACATTATCAGCATTTCTGTGCCTA 1089
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1090 GGAGGACTGGCTTGTCTTATTGTAATGTTTCTTCCAGAAAAGAAAGACACAGGTGTGTTTGCAGTGGTGAACAG 1163
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1164 CCATTCCTTGTCCTTGCTGGGGAAGCTGACCATCAGTGCTGCCTTTAACATTGTTTATATCTACACCTCTGAGC 1237
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1238 TTTACCCTACAGTCATCAGGAATGTTGGGCTTGGAACTTGTTCCATGTTCTCCCGAGTTGGTGGGATTATTGCT 1311
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1312 CCCTTCATCCCCTCACTGAAATATGTGCAATGGTCTTTACCATTCATTGTCTTCGGAGCCACGGGTCTGACCTC 1385
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1386 CGGCCTCCTGAGTTTGTTATTGCCGGAGACCCTTAACAGTCCGCTGCTAGAAACATTCTCCGACCTTCAGGTGT 1459
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1460 ATTCGTATCGCAGGCTGGGAGAAGAAGCATTATCTTTACAGGCTTTGGACCCCCAACAGTGTGTGGACAAGGAG 1533
Sbjct 1314 -------------------------------------------------------------------------- 1313
Query 1534 AGCTCTTTAGGGAGTGAGAGTGAGGAAGAGGAAGAATTTTATGATGCAGATGAAGAGACTCAGATGATCAAG 1605
Sbjct 1314 ------------------------------------------------------------------------ 1313
