Construct: ORF ccsbBroad304_12211

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013273.1_s304c1, BRDN0000410358
Derived from:
ccsbBroadEn_12211
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC22A15 (55356)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12211
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55356 SLC22A15 solute carrier family 22 me... NM_018420.3 97.6% 97.6% (many diffs)
2 human 55356 SLC22A15 solute carrier family 22 me... XM_024448238.1 73.2% 67.7% (many diffs)
3 human 55356 SLC22A15 solute carrier family 22 me... XM_024448239.1 70.5% 69.4% (many diffs)
4 human 55356 SLC22A15 solute carrier family 22 me... XR_002957032.1 58.7% (many diffs)
5 human 55356 SLC22A15 solute carrier family 22 me... XR_002957031.1 56.2% (many diffs)
6 human 55356 SLC22A15 solute carrier family 22 me... XM_005271004.3 55.7% 55.3% (many diffs)
7 human 55356 SLC22A15 solute carrier family 22 me... XR_002957034.1 55.4% (many diffs)
8 human 55356 SLC22A15 solute carrier family 22 me... XR_002957029.1 54.7% (many diffs)
9 human 55356 SLC22A15 solute carrier family 22 me... XR_002957035.1 54.5% (many diffs)
10 human 55356 SLC22A15 solute carrier family 22 me... XR_002957030.1 54.2% (many diffs)
11 human 55356 SLC22A15 solute carrier family 22 me... XR_002957033.1 51.7% (many diffs)
12 human 55356 SLC22A15 solute carrier family 22 me... XR_002957027.1 43.4% (many diffs)
13 mouse 242126 Slc22a15 solute carrier family 22 (o... NM_001039371.2 85.5% 91.4% (many diffs)
14 mouse 242126 Slc22a15 solute carrier family 22 (o... XR_001783691.1 19.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1671
ORF length:
1605
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg catctaccag atgtacttgt gcttcctgct ggccgtgctg ctgcagctct
121acgtggccac ggaggccatc ctcattgcac tggttggggc cacgccatcc taccactggg
181acctggcaga gctcctgcca aatcagagcc acggtaacca gtcagctggt gaagaccagg
241cctttgggga ctggctcctg acagccaacg gcagtgagat ccataagcac gtgcatttca
301gcagcagctt cacctccatc gcctcggagt ggtttttaat tgccaacaga tcctacaaag
361tcagtgcagc aagctctttt ttcttcagtg gtgtatttgt tggagttatc tcttttggtc
421agctttcaga tcgcttcgga aggaaaaaag tctatctcac aggttttgct cttgacatct
481tatttgcaat tgcaaatgga ttttccccct catatgagtt ctttgcagta actcgcttcc
541tggtgggcat gatgaatgga gggatgtcgc tggtggcctt tgtcttgctt aatgagtgtg
601tgggcaccgc ctactgggca cttgcaggat cgattggcgg cctcttcttt gcagttggca
661ttgcccaata tgccctgtta ggatacttca tccgctcctg gaggacccta gccattctgg
721ttaacctgca gggaacggtg gtctttctct tatctttatt cattcctgaa tcacctcgtt
781ggttatactc ccagggtcga ctgagtgagg ctgaagaggc gctgtacctc attgccaaga
841ggaaccgcaa actcaagtgc acgttctcac taacacaccc agccaacagg agctgcaggg
901agactggaag tttcctggat ctctttcgtt accgggtcct gttaggacac actttgatcc
961tgatgttcat ctggtttgtg tgcagcttgg tgtattatgg cctaactctg agtgcgggtg
1021atctaggtgg aagtatttat gccaacctgg ccctgtctgg cctcatagag attcaatctt
1081accctctctg tatctacttg attaaccaaa aatggtttgg tcggaagcga acattatcag
1141catttctgtg cctaggagga ctggcttgtc ttattgtaat gtttcttcca gaaaagaaag
1201acacaggtgt gtttgcagtg gtgaacagcc attccttgtc cttgctgggg aagctgacca
1261tcagtgctgc ctttaacatt gtttatatct acacctctga gctttaccct acagtcatca
1321ggaatgttgg gcttggaact tgttccatgt tctcccgagt tggtgggatt attgctccct
1381tcatcccctc actgaaatat gtgcaatggt ctttaccatt cattgtcttc ggagccacgg
1441gtctgacctc cggcctcctg agtttgttat tgccggagac ccttaacagt ccgctgctag
1501aaacattctc cgaccttcag gtgtattcgt atcgcaggct gggagaagaa gcattatctt
1561tacaggcttt ggacccccaa cagtgtgtgg acaaggagag ctctttaggg agtgagagtg
1621aggaagagga agaattttat gatgcagatg aagagactca gatgatcaag tgcccaactt
1681tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1741agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

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