Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12227
- Subject:
- NR_133915.3
- Aligned Length:
- 3590
- Identities:
- 541
- Gaps:
- 3049
Alignment
Query 1 ---------------------------------------------ATGGCTGCATCCCAGCAGCAAGCTTCAGC 29
|||||||||||||||||||||||||||||
Sbjct 1 GAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTACGCGAGGAAGATGGCTGCATCCCAGCAGCAAGCTTCAGC 74
Query 30 GGCTTCCTCAGCTGCTGGTGTATCGGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGC 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCTTCCTCAGCTGCTGGTGTATCGGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGC 148
Query 104 CAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCCTGTGCAGCGT 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCCTGTGCAGCGT 222
Query 178 TATAAGATGCTCATCCCGCAGCTGAAGGAGAGTCTACAGACCTTGATGAAGGTTGCGGCCCAAAACTTGATTCA 251
|||||||||||||||||||||||||||||||||||||||
Sbjct 223 TATAAGATGCTCATCCCGCAGCTGAAGGAGAGTCTACAG----------------------------------- 261
Query 252 GAACACTAACATCGACAATGGACAAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGT 325
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ------------------------AAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGT 311
Query 326 TCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 TCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT 385
Query 400 GCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTACCC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 GCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTACCC 459
Query 474 ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGACTGTGCCA 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 460 ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGACTGTGCCA 533
Query 548 ACAAGGTCACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGGGGCACTCTG--------------------- 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 ACAAGGTCACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGGGGCACTCTGTGAAGTGGGGGACAGGGAGTG 607
Query 601 -------------------------------------------------------------------------- 600
Sbjct 608 GGGCAGGCAGTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAGCCTCCTC 681
Query 601 -------------------------------------------------------------------------- 600
Sbjct 682 TCTTCCTGCCTGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGGCCGGGCC 755
Query 601 -------------------------------------------------------------------------- 600
Sbjct 756 CCTGCGTCCCTGCCCCTTCTTCCTGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACT 829
Query 601 -------------------------------------------------------------------------- 600
Sbjct 830 TCTCTGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGTGGAGCCCTGGCTGTCCCCTCTCCCTCAGTCCTTC 903
Query 601 -------------------------------------------------------------------------- 600
Sbjct 904 CTGACTGTCTCCAGCTGGGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCTATTACAGTTGTGTCTCTCTCA 977
Query 601 -------------------------------------------------------------------------- 600
Sbjct 978 TCCTGTCTCTTTTTCCCTTGTTTCTCTGTTCCTGTTAATGTGTTTCTCCCCATGGTCCTATTTCTCTCACTCTG 1051
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1052 ACCTCTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGG 1125
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1126 GCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAGTCC 1199
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1200 CCCAGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAGGGGCCCAGGCTC 1273
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1274 TGAGCTCCACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGG 1347
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1348 GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAG 1421
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1422 TGAAAAGGCCCCAGCCGGGGTGAATCATCAGTCCTGGGGAAGAACCCAGGCGCCTGAGCCCCAGCTCCGGGAAG 1495
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1496 CAGGCACTGGGGAGGGGGCTTCAAGGAGGGAGTGCCCCCTCAGACTCCCTGCTTCCCTGGAAGCTTCAGGAAGC 1569
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1570 TCAGCCTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGAAA 1643
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1644 GCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC 1717
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1718 TCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCTGTGATTCACGCT 1791
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1792 GAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCTTATTCTT 1865
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1866 CCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCTAGGAGGAATTTCTCCTTCAGG 1939
Query 601 -------------------------------------------------------------------------- 600
Sbjct 1940 GGAGCCTCAGTTTTGCCCATTTATCTAATTGAATCAGTTTTTTACCCAATCCCCCGATTTTGTAGGATAATCTC 2013
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2014 CCTTATCTAAAGTCAACTGATTATGGACTTTAATCACATCTACAAAACACTTCCATGGCGACAGCTAGATGAGT 2087
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2088 GTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAACTGACCATCGGGCCGGGGGCGGTGGCTCA 2161
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2162 CGCCTGTAATCCCAACACTTTGGGAGCCCGAGGCGGGCGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCC 2235
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2236 AACACGGTGAAACCCCGACTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCACACACCTGTAGTCCCA 2309
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2310 GCTACTCGGGAGGCTGAGGCAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCACACT 2383
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2384 ATTGCACTCCAGCCTGGGCGACAGGGCAAGACTCTGTCTCAAAAAAAATAAAAAACTGACCATCTAGTCCTTGT 2457
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2458 CATCTGGGCACCCTCACACATCTCCTTAACCACACTTAATCTCCAAATAAGTACGATAACATAGTCATAGTCCC 2531
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2532 ACCCAACATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAGAGCCCACCAGCAGT 2605
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2606 GGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACAA 2679
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2680 CATCACACACAGGTGGGGGGGCCTGATAGCCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACC 2753
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2754 CAGGGAGCCCACAGAGGCACTCAGTGGGTGGTGGGGTGATGGATACACATCTATCAGGCACAGGGCGGAGGTGG 2827
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2828 GCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTC 2901
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2902 TAGTGAGAGACAGTAAATGTGACAAAAGTAAAATATATCAGATGGTGAGAAAACAGAAAAATGAGATCAGAAGT 2975
Query 601 -------------------------------------------------------------------------- 600
Sbjct 2976 GGAGATGTTGGGGCCAGGCACAGTGGCCCAGGCCTGTAATCCCATCACTTTGGGAGGTGCAGGCAGGCAGATGG 3049
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3050 CTTGAGCCCAGGAATTCAAGACCAGTCCGAGCAACATAGCAAAAGCCCTTATCTGCAAAAAATTCAAAAATTAG 3123
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3124 CCAGGTGTGGTGGTGCGTGCCCAGGTTCCCAGGTACTCGGAGGCTGAGAGGTGGGAGGATGCCTTGAGCTTGAG 3197
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3198 AGGTTGAAGCTGCAGTGAGCTGTGATCGCACCACTGCACTCCAGCTTGGTTCATGGAGACCCTGTTTTTTTAAA 3271
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3272 AAAAGAAGTGGAGGTGTTTACACCAGCAAAATACTCATTTTTTAAGTGTAATTAAGTTGAAGATCAAAAAATGG 3345
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3346 AAATGTATAATTAAATCATACTTAGCAAATCTAACACATGAAATGTAACATCTGCATATGGAGAATCGTGTTAC 3419
Query 601 -------------------------------------------------------------------------- 600
Sbjct 3420 TTTATTGAAAAACATTAAAAGTTTGAGAACTTAAGTTGGATTGTGGTTTCGTGAGCATTCATTATGGTTTATAT 3493
Query 601 -------------------------------------- 600
Sbjct 3494 ATGTTCCATGTATTTATTATTAAATAGATGACAAGGGT 3531
