Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12232
• Subject: NR_104586.2
• Aligned Length: 1307
• Identities: 620
• Gaps: 666

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGCTT  74

Query    1  -------------------------------------------------------------ATGTCGGCGGCGG  13
                                                                         |||||||||||||
Sbjct   75  CTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGCGG  148

Query   14  GAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCC  222

Query   88  TGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA  296

Query  162  CTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGTGA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGTGA  370

Query  236  GAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGA  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGA  444

Query  310  CATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCC  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCC  518

Query  384  CATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGAGT  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct  519  CATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA--  590

Query  458  TTATTTC-ACA------GAGCAGTGTACATTCTTGTCTTCCA-----------GGGGAACTTCAACATGGAGTT  513
             ||.|.| |.|      |||||               |||||           ..|.||||.|.||| ||.|.|
Sbjct  591  -TAATCCTAGAAAGGGGGAGCA---------------TTCCATATAGAAACTGCTGAAACTGCCACA-GGTGCT  647

Query  514  ACTTTTGATCCCT--CAGTT------TTAA---TTCAGTGTC----------------------------TAAA  548
            .||....|..|||  |||||      ||.|   ||||||.||                            |..|
Sbjct  648  TCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGA  721

Query  549  GCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT  622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  722  GCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT  795

Query  623  CTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA------------------------------------  660
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct  796  CTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGAATGT  869

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  870  ATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGA  943

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  944  AAGCTAGAACTGAAGGTGAGACCGCTTTGCGGGTGGGAAGAGCACACTTATTTTTCCTTTCTGTAATATGTTTT  1017

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1018  CTTTTTATGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGGATTGTGCGGT  1091

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1092  GACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGAATGTGAGGGAAATACTGA  1165

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1166  TGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTTTTTAAT  1239

Query  661  -------------------------------------------------  660
                                                             
Sbjct 1240  TTGTTGTATCTGTTTGAAATATATCTATTAAAGAAAATCTGCCACTGTG  1288