Construct: ORF ccsbBroad304_12232

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008426.1_s304c1, BRDN0000402843
Derived from:
ccsbBroadEn_12232
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD10 (55608)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12232
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55608 ANKRD10 ankyrin repeat domain 10 NM_001286721.2 100% 100%
2 human 55608 ANKRD10 ankyrin repeat domain 10 XM_024449381.1 76.4% 69.6% (many diffs)
3 human 55608 ANKRD10 ankyrin repeat domain 10 XM_024449382.1 72.4% 66% (many diffs)
4 human 55608 ANKRD10 ankyrin repeat domain 10 XM_024449383.1 70.3% 69% 458_459insTATTTCACAGA;461_462insGTGTACAT;465_465delGins177
5 human 55608 ANKRD10 ankyrin repeat domain 10 XM_024449380.1 54.4% 50.4% 455_456ins94;567_945del
6 human 55608 ANKRD10 ankyrin repeat domain 10 NR_104586.2 47.4% (many diffs)
7 human 55608 ANKRD10 ankyrin repeat domain 10 NM_017664.4 41.8% 38.3% 455_456ins94;567_1260del
8 human 55608 ANKRD10 ankyrin repeat domain 10 NR_104587.2 25.8% 1_135del;796_2557del
9 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957459.1 25.4% 1_137del;798_2591del
10 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957468.1 24.4% 1_137del;593_701del;907_2700del
11 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957467.1 23.7% 1_137del;593_783del;989_2782del
12 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957461.1 23.6% (many diffs)
13 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957463.1 22.4% (many diffs)
14 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957462.1 19.4% (many diffs)
15 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957460.1 18.4% 1_137del;685_1529del;1643_3581del
16 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957464.1 18.1% (many diffs)
17 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957458.1 17.8% 1_137del;592_593ins94;704_3084del
18 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957466.1 17.4% (many diffs)
19 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957465.1 15.6% (many diffs)
20 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957469.1 10.7% (many diffs)
21 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957471.1 10.5% (many diffs)
22 human 55608 ANKRD10 ankyrin repeat domain 10 XR_002957470.1 9.7% (many diffs)
23 mouse 102334 Ankrd10 ankyrin repeat domain 10 XM_006508687.3 52.3% 50.8% (many diffs)
24 mouse 102334 Ankrd10 ankyrin repeat domain 10 NM_001167967.2 47.6% 46% (many diffs)
25 mouse 102334 Ankrd10 ankyrin repeat domain 10 NM_133971.3 37% 35.3% (many diffs)
26 mouse 102334 Ankrd10 ankyrin repeat domain 10 XM_006508685.3 36.9% 35.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
726
ORF length:
660
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc ggcggcggga gcgggcgcgg gcgtagaggc gggcttctcc agcgaggagc
121tgctctcgct ccgtttcccg ctgcaccgcg cctgccgcga cggggacctg gccacgctct
181gctcgctgct gcagcagaca ccccacgccc acctggcctc tgaggactcc ttctatggct
241ggacgcccgt gcactgggcc gcgcatttcg gcaagttgga gtgcttagtg cagttggtga
301gagcgggagc cacactcaac gtctccacca cacggtacgc gcagacgcca gcccacattg
361cagcctttgg gggacatcct cagtgcctgg tctggctgat tcaagcagga gccaacatta
421acaaaccgga ttgtgagggt gaaactccca ttcacaaggc agctcgctct gggagcctag
481aatgcatcag tgcccttgtg gcgaatgggg ctcacgtcga gtttatttca cagagcagtg
541tacattcttg tcttccaggg gaacttcaac atggagttac ttttgatccc tcagttttaa
601ttcagtgtct aaagcctgag aaatgccagt ggcctgacag cagcagacat tgcacaaacc
661cagggtttcc aagagtgtgc ccagtttctc ttgaacctcc agaattgtca tctgaaccat
721ttctataccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
781gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
841acctctggat ta

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