Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12232
- Subject:
- XR_002957467.1
- Aligned Length:
- 2782
- Identities:
- 660
- Gaps:
- 2122
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC 74
Query 1 ---------------------------------------------------------------ATGTCGGCGGC 11
|||||||||||
Sbjct 75 TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC 148
Query 12 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 222
Query 86 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 296
Query 160 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 370
Query 234 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 444
Query 308 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 518
Query 382 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 TAACCCCAAGAAAGGCATCAGGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAAGGCCTTGATTTCATCATG 666
Query 456 -------------------------------------------------------------------------- 455
Sbjct 667 CTTTTGCTGTGGATGTAGTGTAGCTTGCTGAACAGGTATGGAAGCTGTCTTTGCTGTTAAGTACTTCTCCCGTT 740
Query 456 -------------------------------------------GTTTATTTCACAGAGCAGTGTACATTCTTGT 486
|||||||||||||||||||||||||||||||
Sbjct 741 TGTTTATCAACCTGCAGCTAACAGGATGTCTGCTTTTTTACAGGTTTATTTCACAGAGCAGTGTACATTCTTGT 814
Query 487 CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGAGAAATG 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGAGAAATG 888
Query 561 CCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTC 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTC 962
Query 635 CAGAATTGTCATCTGAACCATTTCTA------------------------------------------------ 660
||||||||||||||||||||||||||
Sbjct 963 CAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGAATGTATTTCCTAATCA 1036
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1037 TATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTG 1110
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1111 AAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTT 1184
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1185 GATAGGGAGTTTGCTGTTGTAACAGATATGAAAAACAGTAGCTCCGTATCGAATACATTGACAAATGGATGTGT 1258
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1259 CATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCAGGAATGGCCAGTGCTTGA 1332
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1333 CAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTGCATT 1406
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1407 AGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAG 1480
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1481 TCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACTATGGACACTACC 1554
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1555 ACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTG 1628
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1629 CAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTC 1702
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1703 TCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAA 1776
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1777 CTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGT 1850
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1851 GCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCCTTTTTATAAGGTGCACTTTTGGAG 1924
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1925 TTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGATATTGCCATTTTTCTTTTTGTTAAAA 1998
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1999 GATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCATCAT 2072
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2073 TTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGTACAGCC 2146
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2147 TTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCTTTTTCAATGAAGCTTTGCAGATCACC 2220
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2221 ATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGATGAAGATCACTGCCTTGGGCTTCATG 2294
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2295 GAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTCCACACTTCCTACTTGGTCTCTGGAAG 2368
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2369 TTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATTTGTAGAAACTGTCAGGTCAAAATATT 2442
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2443 TAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTTGGGGTTTTCTGCTTTAAGATATATAC 2516
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2517 CACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAAACTGCATTAAGTTTTTGATTTTGTAG 2590
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2591 AAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTGTAATGAATTTTTACTTTTTTGATTTT 2664
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2665 TGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGTTCTAAGAGTGTTACTAACATTTTGTT 2738
Query 661 -------------------------------------------- 660
Sbjct 2739 CTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTCA 2782
