Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12272
Subject:
XM_024452987.1
Aligned Length:
5193
Identities:
671
Gaps:
4518

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCAGCGTCGTGTGGATCAAAATGGAGTGCTTTATGTCAGTCCCAGTGGGTCTTTGTTATCTTGCTTGGAGCAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTAAAACATACCTGCTTACTGATGGAACATGCAAGTGTGGCTTGGAATGTCCTCTTATTCTTCCCAAGGTATTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTTTGATCCTGGAGCTGCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACAAAGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATGCATACATAAAAGAAAAATTATTGCAGTGGCCACACTTCATAAAAGCATGGAAGCCCCACATCCTTCTCTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCTCACCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGAAATAAGTCTCATGAAGGAATTACAAATTCTGTAATGCCTGAATGTAAGAATCCTTTCAAGTTAATGATTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCATCAAATGCCATGGGAAGGCTATATGTACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAAGGACTGACCCACTTGGAAGTCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGATGTTTTCACAAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTCTAGTCCTATTCACCTGAATAGGACTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTCTTTCTCCACCTTCAGTAATGCTACATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCTGGAAGGACTAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATACCTCTTTCCCCAACCTTGACTACAAAGAGTCCAGTAATGAAAAAACCAATGTGTAATTTTTCAACTAATAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAAATACCACGAGCAATGTTCCACCACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCACCTTCTTGTGCTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCAGAAAAAGCCATTAACATCTGAGAAAGATCCACTTGGCATTCTTGACCCTATTCCTAGTAAACCAGTGAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGAACCCTGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTATGATGAATGTAAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGAGTCATGTACAAAGAGTTCAGCATTCAGCTTCAACCTCCCTGTCCCCTTCTCCAGTGACATCCCCCGTGCAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGATGGGGACTGGAATTGGAAGGATTGAGGCATCGCCCCAAAGATCACGCTCATCTTCCACATCATCAGATCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGAAATTTCATGATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGGTATTAAGGTTCCACCCAGGTCACCAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCATCAAGCCCTTCTACCAAGTCCGATGGACATCATCAGTAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAGGATATCCCTAACCCATTAATTGCTGGAATAAGTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTCCTAC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGCATCTGCCGGAAGTAGTTCTGTAAAGAGTCAGCCTGGTTTGCTGGGAATGCCTTTAAATCAGATCTTGAACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAAAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAGGACA  1850

Query    1  ----------------ATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCGAG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TAGCACTTTAAACACCATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCGAG  1924

Query   59  CAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACAACCACCTACGACAGTG  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACAACCACCTACGACAGTG  1998

Query  133  TTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTGACTTGCTAAGGAAGCA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTGACTTGCTAAGGAAGCA  2072

Query  207  GGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAAAGCTCTCACTTGA  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAAAGCTCTCACTTGA  2146

Query  281  GTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAACCAGCTGCATTTTACA  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAACCAGCTGCATTTTACA  2220

Query  355  GATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA  2294

Query  429  CACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATAAATCAGATTCAGGCTA  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  CACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATAAATCAGATTCAGGCTA  2368

Query  503  GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCCCAATCCACCTCAGTCA  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCCCAATCCACCTCAGTCA  2442

Query  577  AGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATCAAACAAGTTCTGAAGC  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  AGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATCAAACAAGTTCTGAAGC  2516

Query  651  AGGTATGGTT--------TTAT------TAGAAAAAAGTACCCAAA---GGTAC--------------------  687
            |||  .||||        |.||      |||          |||.|   ||.||                    
Sbjct 2517  AGG--CGGTTCAGGACCATCATCCTCCATAG----------CCATAGCGGGCACCAACCACCCTGCCATCACAA  2578

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2579  AGACAACATCTGTTCTTCAAGATGGCGTCATAGTCACCACTGCAGCTGGAAACCCACTGCAGAGTCAGCTACCC  2652

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2653  ATTGGGAGTGATTTTCCTTTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCCAACAGCACTTCAAACAACCA  2726

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2727  TCTTCCACACCCCTTGAACCCCAGCCTCCTCAGTTCTCTACCTATCTCTTTGCCAGTGAATCAACAGCATCTCC  2800

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2801  TAAACCAGAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGAAGGCAAGTCTGAGATCAACCTCCACCCTTTA  2874

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2875  GGTTTTCTCAACCCGAATGTAAACGCTGCTTTAGCTTTTCTCTCCAGTGACATGGATGGGCAGGTATTGCAGCC  2948

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 2949  TGTTCACTTTCAGCTCTTAGCAGCCTTGCTTCAGAACCAAGCCCAAGCAGCTGCCATGCTTCCCCTGCCATCTT  3022

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3023  TCAATCTGACCATCTCAGATCTTTTGCAACAGCAAAATACCCCTTTACCCTCATTAACACAGATGACAGCCCCA  3096

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3097  CCAGACCATTTGCCAAGCAATCAGTCAGACAACAGCCGAGCTGAGACCCTTTTAACCAGCCCCCTGGGGAACCC  3170

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3171  TTTACCAAGCTTTGCAGGCAGTGACACTACTTTTAACCCCCTGTTCCTCCCAGCTGTCAATGGGGCCTCAGGAT  3244

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3245  TAATGACCTTGAATCCCCAGCTGTTGGGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAG  3318

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3319  GTTTCCATAGCAACCTCCTCCCAGGCAACCACTACCACAACCACTACATCATCAGCAGTGGCAGCACTGACTGT  3392

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3393  CTCAACACTTGGTGGGACAGCAGTGGTGTCAATGGCAGAAACATTGCTGAATATATCTAATAATGCTGGGAATA  3466

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3467  CACCTGGTCCAGCTAAACTCAACAGTAACTCTGTGGTGCCACAGCTACTTAACCCTCTACTGGGGACAGGTCTA  3540

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3541  CTTGGTGATATGTCATCAATAAACAATACTTTGAGTAACCATCAACTGACTCATCTACAGTCGCTGTTAAACAA  3614

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3615  CAATCAGATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTTCCAAG  3688

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3689  GACAGTCCACAATTCCTTGCCCAGCTAACAATAACCCCATGGCTTGTCTGTTTCAGAACTTTCAGGTGAGAATG  3762

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3763  CAGGAAGATGCAGCTCTCCTAAACAAAAGAATAAGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAA  3836

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3837  CACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGG  3910

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3911  TGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCA  3984

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 3985  GCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCT  4058

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4059  GAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTGACCCATTAAATCTCTCCAGTGCTGTCAGTGCGGTCATTC  4132

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4133  ATGGACGGAACATGGGAGGTGTTGATCATGATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGCCCAAGAAT  4206

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4207  CTAGACCATGGGAAAAATGTGAACGAAGGAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACATCCAA  4280

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4281  AAAACAGTGGGACGGGGAGCAAAGCCCCAGAGGGGAGCGAAACAGGTGGAAGTACGAGGAATTTTTAGATCATC  4354

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4355  CAGGCCATATCCACAGTAGTCCTTGTCATGAAAGGCCCAACAATGTCTCTACACTGCCATTTCTGCCTGGGGAA  4428

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4429  CAGCACCCAATACTGTTACCACCAAGAAACTGTCCAGGGGATAAAATTCTAGAGGAAAATTTCAGGTATAATAA  4502

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4503  CTACAAAAGAACTATGATGAGTTTTAAGGAGAGACTAGAGAACACTGTGGAAAGATGTGCACACATAAATGGGA  4576

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4577  ATAGACCTCGACAGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAG  4650

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4651  TCTCCAAGTTCCTCAAATAGTTTGGAAAATTCTCTGGTCAAAGACTACATCCATTACAATGGAGACTTTAATGC  4724

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4725  CAAAAGCGTTAATGGGTGTGTGCCTAGCCCTTCAGATGCTAAAAGCATTAGTAGTGAAGATGACCTAAGGAACC  4798

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4799  CAGACTCCCCCTCTTCAAATGAATTGATACATTATAGACCAAGGACGTTCAATGTTGGCGACTTGGTCTGGGGC  4872

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4873  CAAATCAAAGGACTGACTTCCTGGCCTGGAAAATTAGTAAGAGAAGACGACGTTCACAATTCATGTCAACAAAG  4946

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 4947  CCCCGAGGAAGGGAAGGTGGAGCCCGAGAAGTTGAAGACACTAACAGAAGGTTTGGAAGCCTACAGCCGTGTCC  5020

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 5021  GGAAAAGGAACAGAAAAAGTGGAAAGCTAAATAACCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGAACTG  5094

Query  688  --------------------------------------------------------------------------  687
                                                                                      
Sbjct 5095  GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGACCCCCCAAACCCAAGAGGAG  5168

Query  688  -------------  687
                         
Sbjct 5169  GAAGATCTCCAGA  5181

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