Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12273
- Subject:
- XM_006513214.3
- Aligned Length:
- 1882
- Identities:
- 979
- Gaps:
- 758
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCAGGGATAACTAGGGTGGTGGGCAGTTCTGGAACATCCCAGGAGGGGAAGGATGCTCTCCATCTTGGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGTGACCTGCCTTCTGATGAGGAAGTCATCAATAGTTCTGATGAAGATGATGTCAGCTCCGAGTCCAGTAAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAGCCAGACCCCCTGGAGGATAAACAGGATGAAGATGCTGGGATGAAAAGCAAAGTTCATCATATTGCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGATCATGAGCTCCGAGAAAGTGTTTGTGGATGTGTTAAAGCTTTTGCATATTGACTTCCGGGGTGCTGTAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGCATCCAGGCAGCTCGGGAAGCCCGTGATTGAGGACCGGATCCTTAACCAGATCCTGTACTACCTGCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTGTACGAGCTCAACCGGGATCTCCTGAAGGAACTGGAAGAGCGAATGCTCACCTGGACAGAACAACAAAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGCTGATATCTTTGTAAAGAAGGGGCCATACTTAAAAATGTATTCCACATACATCAAAGAATTTGATAAGAA 518
Query 1 -------------------------------------------------------------------ATGAGCC 7
|||||||
Sbjct 519 CGTAGCTTTGCTGGATGAGCAGTGCAAGAAAAATCCAGGATTTGCTGCAGTTGTCAGAGAATTCGAGATGAGCC 592
Query 8 CTCGCTGTGCTAATCTGGCCCTCAAGCACTACCTGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTG 81
||||.|||||.||.||||||||.||||||||||||||.|||||.||||||||||||||.||||||||||||.|.
Sbjct 593 CTCGATGTGCCAACCTGGCCCTGAAGCACTACCTGCTAAAGCCAGTTCAGAGGATCCCTCAGTACAGGCTGCTA 666
Query 82 CTGACAGATTATTTGAAGAATCTCATAGAAGATGCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGT 155
|||||||||||.||.|||||.||..|||||||..|||.||||.||||||||||.|||||||||||.||||||||
Sbjct 667 CTGACAGATTACTTAAAGAACCTTCTAGAAGACTCTGTAGATCACAGAGACACCCAAGATGCCCTGGCTGTTGT 740
Query 156 TGTAGAGGTAGCCAACCACGCCAATGACACCATGAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGT 229
..||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||.||.|||||.|||||||
Sbjct 741 CATAGAGGTAGCTAACCATGCCAATGACACCATGAAGCAAGGGGACAACTTTCAGAAGCTCATGCAGATTCAGT 814
Query 230 ACAGCTTAAATGGACACCATGAAATTGTGCAGCCTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTG 303
|||||||||.|||||||||||||||||||||.||.||.|||||||||||.||||||||.|..||||||||||||
Sbjct 815 ACAGCTTAAGTGGACACCATGAAATTGTGCAACCCGGGCGGGTTTTTCTTAAAGAAGGCACCCTGATGAAGCTG 888
Query 304 TCTCGGAAAGTGATGCAACCTCGAATGTTTTTCCTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTC 377
|||||||||||.|||||.||.||.|||||||||||||||||.|||||.||.||.||.||.|||||..|||||||
Sbjct 889 TCTCGGAAAGTCATGCAGCCCCGGATGTTTTTCCTGTTTAACGATGCTCTTCTCTACACCACACCCATGCAGTC 962
Query 378 TGGGATGTATAAACTGAACAACATGCTCTCACTGGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATC 451
|||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||.||||
Sbjct 963 TGGGATGTACAAACTGAACAACATGCTCTCGCTGGCTGGAATGAAGGTCAGAAAACCTACCCAGGAGGCATATC 1036
Query 452 AGAATGAATTAAAGATTGAAAGTGTAGAACGTTCCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAA 525
||||.||.||||||||||||||||||||.|||||.|||||.||||||||.|||||||||.|||||||.|||||.
Sbjct 1037 AGAACGAGTTAAAGATTGAAAGTGTAGAGCGTTCTTTCATCCTCTCAGCTAGTTCTGCCGCAGAAAGAGATGAC 1110
Query 526 TGGCTAGAAGCGATTTCCAGGGCAATAGAAGAGTATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCT 599
|||||.||.||.||.|||||..|.|||||||||||||||||||||||||||||.|||||.||.||.||||||||
Sbjct 1111 TGGCTGGAGGCCATATCCAGCTCCATAGAAGAGTATGCCAAGAAAAGAATCACATTCTGCCCCAGCAGGAGTCT 1184
Query 600 TGATGAGGCAGACTCAGAAAATAAAGAAGAAGTTAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATA 673
|||.||| ||||||||||..||||||||||||||.||.||.||..|.|||||||||||||||||.||.||.|
Sbjct 1185 TGACGAG---GACTCAGAAAGGAAAGAAGAAGTTAGCCCCCTCGGGGCAAAGGCTCCCATCTGGATCCCAGACA 1255
Query 674 CCAGAGCCACAATGTGTATGATCTGCACAAGCGAATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGT 747
||||||||||.|||||||||||.||||||||.||||||||.||.|||||||||.|||||||||||.||||||||
Sbjct 1256 CCAGAGCCACCATGTGTATGATTTGCACAAGTGAATTCACCCTGACCTGGAGAAGACACCACTGCAGGGCCTGT 1329
Query 748 GGAAAGATTGTATGCCAAGCTTGTTCGTCTAATAAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGT 821
||.||||||||.|||||||||||.||.||.||.||||||||||||||||||||||||...||||..||||||||
Sbjct 1330 GGGAAGATTGTGTGCCAAGCTTGCTCATCAAACAAGTATGGCTTAGATTACCTGAAAGGGCAACTGGCAAGAGT 1403
Query 822 ATGTGAACATTGTTTCCAAGAACTGCAGAAATTAGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATC 895
.||.||.||.||.||||||||.||.|||||||||||||||||||..||.||||||.||||.|||||.|||||||
Sbjct 1404 GTGCGAGCACTGCTTCCAAGAGCTACAGAAATTAGATCACCAGCTGTCGCCTAGGGTTGGGTCTCCCGGAAATC 1477
Query 896 ACAAATCTCCTTCAAGTGCCTTATCATCAGTCTTACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCA 969
||||.|||||||||||||||||.||.|||||||||||||||||.||.|||||||||||.|||||.||||||||.
Sbjct 1478 ACAAGTCTCCTTCAAGTGCCTTGTCGTCAGTCTTACATAGCATCCCGTCAGGGAGGAAGCAGAAGAAAATCCCC 1551
Query 970 GCTGCTCTCAAAGAAGTATCAGCAAACACAGAGGATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAA 1043
|||||||||||||||||.||||||||||||||.||.||..|||||||.||||||.|.||||||||.|||||||.
Sbjct 1552 GCTGCTCTCAAAGAAGTGTCAGCAAACACAGAAGACTCCACTATGAGCGGCTACCTCTACAGATCCAAGGGCAG 1625
Query 1044 TAAAAAACCCTGGAAACACTTTTGGTTTGTCATAAAAAATAAAGTACTATATACATATGCTGCAAGTGAGGTA- 1116
||||||.||.|||||||||||.|||||||||||.|||||.||||||||.||.||||||||||||||.|||| |
Sbjct 1626 TAAAAAGCCATGGAAACACTTATGGTTTGTCATCAAAAACAAAGTACTCTACACATATGCTGCAAGCGAGG-AC 1698
Query 1117 -----AGATCTG--AAATC------------------------------------------------------- 1128
||.|.|| ||.||
Sbjct 1699 GTGGCAGCTTTGGAAAGTCAGCCTTTATTAGGCTTCACCGTCACTCTAGTCAAGGATGAGAACTCAGAGTCTAA 1772
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1773 AGTGTTTCAGCTGCTGCACAAAGGCATGGTGTTTTACGTATTTAAGGCAGACGATGCCCACTCCACGCAGAGGT 1846
Query 1129 -------------------------------- 1128
Sbjct 1847 GGATAGACGCATTTCAGGAAGGCACAGTATTG 1878
