Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12273
Subject:
XM_006513214.3
Aligned Length:
1882
Identities:
979
Gaps:
758

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCAGGGATAACTAGGGTGGTGGGCAGTTCTGGAACATCCCAGGAGGGGAAGGATGCTCTCCATCTTGGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGTGACCTGCCTTCTGATGAGGAAGTCATCAATAGTTCTGATGAAGATGATGTCAGCTCCGAGTCCAGTAAAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGAGCCAGACCCCCTGGAGGATAAACAGGATGAAGATGCTGGGATGAAAAGCAAAGTTCATCATATTGCCAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGATCATGAGCTCCGAGAAAGTGTTTGTGGATGTGTTAAAGCTTTTGCATATTGACTTCCGGGGTGCTGTAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCATGCATCCAGGCAGCTCGGGAAGCCCGTGATTGAGGACCGGATCCTTAACCAGATCCTGTACTACCTGCCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCTGTACGAGCTCAACCGGGATCTCCTGAAGGAACTGGAAGAGCGAATGCTCACCTGGACAGAACAACAAAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTGCTGATATCTTTGTAAAGAAGGGGCCATACTTAAAAATGTATTCCACATACATCAAAGAATTTGATAAGAA  518

Query    1  -------------------------------------------------------------------ATGAGCC  7
                                                                               |||||||
Sbjct  519  CGTAGCTTTGCTGGATGAGCAGTGCAAGAAAAATCCAGGATTTGCTGCAGTTGTCAGAGAATTCGAGATGAGCC  592

Query    8  CTCGCTGTGCTAATCTGGCCCTCAAGCACTACCTGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTG  81
            ||||.|||||.||.||||||||.||||||||||||||.|||||.||||||||||||||.||||||||||||.|.
Sbjct  593  CTCGATGTGCCAACCTGGCCCTGAAGCACTACCTGCTAAAGCCAGTTCAGAGGATCCCTCAGTACAGGCTGCTA  666

Query   82  CTGACAGATTATTTGAAGAATCTCATAGAAGATGCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGT  155
            |||||||||||.||.|||||.||..|||||||..|||.||||.||||||||||.|||||||||||.||||||||
Sbjct  667  CTGACAGATTACTTAAAGAACCTTCTAGAAGACTCTGTAGATCACAGAGACACCCAAGATGCCCTGGCTGTTGT  740

Query  156  TGTAGAGGTAGCCAACCACGCCAATGACACCATGAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGT  229
            ..||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||.||.|||||.|||||||
Sbjct  741  CATAGAGGTAGCTAACCATGCCAATGACACCATGAAGCAAGGGGACAACTTTCAGAAGCTCATGCAGATTCAGT  814

Query  230  ACAGCTTAAATGGACACCATGAAATTGTGCAGCCTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTG  303
            |||||||||.|||||||||||||||||||||.||.||.|||||||||||.||||||||.|..||||||||||||
Sbjct  815  ACAGCTTAAGTGGACACCATGAAATTGTGCAACCCGGGCGGGTTTTTCTTAAAGAAGGCACCCTGATGAAGCTG  888

Query  304  TCTCGGAAAGTGATGCAACCTCGAATGTTTTTCCTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTC  377
            |||||||||||.|||||.||.||.|||||||||||||||||.|||||.||.||.||.||.|||||..|||||||
Sbjct  889  TCTCGGAAAGTCATGCAGCCCCGGATGTTTTTCCTGTTTAACGATGCTCTTCTCTACACCACACCCATGCAGTC  962

Query  378  TGGGATGTATAAACTGAACAACATGCTCTCACTGGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATC  451
            |||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||.||||
Sbjct  963  TGGGATGTACAAACTGAACAACATGCTCTCGCTGGCTGGAATGAAGGTCAGAAAACCTACCCAGGAGGCATATC  1036

Query  452  AGAATGAATTAAAGATTGAAAGTGTAGAACGTTCCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAA  525
            ||||.||.||||||||||||||||||||.|||||.|||||.||||||||.|||||||||.|||||||.|||||.
Sbjct 1037  AGAACGAGTTAAAGATTGAAAGTGTAGAGCGTTCTTTCATCCTCTCAGCTAGTTCTGCCGCAGAAAGAGATGAC  1110

Query  526  TGGCTAGAAGCGATTTCCAGGGCAATAGAAGAGTATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCT  599
            |||||.||.||.||.|||||..|.|||||||||||||||||||||||||||||.|||||.||.||.||||||||
Sbjct 1111  TGGCTGGAGGCCATATCCAGCTCCATAGAAGAGTATGCCAAGAAAAGAATCACATTCTGCCCCAGCAGGAGTCT  1184

Query  600  TGATGAGGCAGACTCAGAAAATAAAGAAGAAGTTAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATA  673
            |||.|||   ||||||||||..||||||||||||||.||.||.||..|.|||||||||||||||||.||.||.|
Sbjct 1185  TGACGAG---GACTCAGAAAGGAAAGAAGAAGTTAGCCCCCTCGGGGCAAAGGCTCCCATCTGGATCCCAGACA  1255

Query  674  CCAGAGCCACAATGTGTATGATCTGCACAAGCGAATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGT  747
            ||||||||||.|||||||||||.||||||||.||||||||.||.|||||||||.|||||||||||.||||||||
Sbjct 1256  CCAGAGCCACCATGTGTATGATTTGCACAAGTGAATTCACCCTGACCTGGAGAAGACACCACTGCAGGGCCTGT  1329

Query  748  GGAAAGATTGTATGCCAAGCTTGTTCGTCTAATAAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGT  821
            ||.||||||||.|||||||||||.||.||.||.||||||||||||||||||||||||...||||..||||||||
Sbjct 1330  GGGAAGATTGTGTGCCAAGCTTGCTCATCAAACAAGTATGGCTTAGATTACCTGAAAGGGCAACTGGCAAGAGT  1403

Query  822  ATGTGAACATTGTTTCCAAGAACTGCAGAAATTAGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATC  895
            .||.||.||.||.||||||||.||.|||||||||||||||||||..||.||||||.||||.|||||.|||||||
Sbjct 1404  GTGCGAGCACTGCTTCCAAGAGCTACAGAAATTAGATCACCAGCTGTCGCCTAGGGTTGGGTCTCCCGGAAATC  1477

Query  896  ACAAATCTCCTTCAAGTGCCTTATCATCAGTCTTACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCA  969
            ||||.|||||||||||||||||.||.|||||||||||||||||.||.|||||||||||.|||||.||||||||.
Sbjct 1478  ACAAGTCTCCTTCAAGTGCCTTGTCGTCAGTCTTACATAGCATCCCGTCAGGGAGGAAGCAGAAGAAAATCCCC  1551

Query  970  GCTGCTCTCAAAGAAGTATCAGCAAACACAGAGGATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAA  1043
            |||||||||||||||||.||||||||||||||.||.||..|||||||.||||||.|.||||||||.|||||||.
Sbjct 1552  GCTGCTCTCAAAGAAGTGTCAGCAAACACAGAAGACTCCACTATGAGCGGCTACCTCTACAGATCCAAGGGCAG  1625

Query 1044  TAAAAAACCCTGGAAACACTTTTGGTTTGTCATAAAAAATAAAGTACTATATACATATGCTGCAAGTGAGGTA-  1116
            ||||||.||.|||||||||||.|||||||||||.|||||.||||||||.||.||||||||||||||.|||| | 
Sbjct 1626  TAAAAAGCCATGGAAACACTTATGGTTTGTCATCAAAAACAAAGTACTCTACACATATGCTGCAAGCGAGG-AC  1698

Query 1117  -----AGATCTG--AAATC-------------------------------------------------------  1128
                 ||.|.||  ||.||                                                       
Sbjct 1699  GTGGCAGCTTTGGAAAGTCAGCCTTTATTAGGCTTCACCGTCACTCTAGTCAAGGATGAGAACTCAGAGTCTAA  1772

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 1773  AGTGTTTCAGCTGCTGCACAAAGGCATGGTGTTTTACGTATTTAAGGCAGACGATGCCCACTCCACGCAGAGGT  1846

Query 1129  --------------------------------  1128
                                            
Sbjct 1847  GGATAGACGCATTTCAGGAAGGCACAGTATTG  1878

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