Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12277
Subject:
NR_110309.2
Aligned Length:
2385
Identities:
1411
Gaps:
972

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTGTTAAGACAAAGGGTGTGCACTTCCTGGCCAGGAAACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAAG  74

Query    1  ---------------------------------------------ATGAGGTCCTGCCTGTGGAGATGCAGGCA  29
                                                         |||||||||||||||||||||||||||||
Sbjct   75  GCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCA  148

Query   30  CCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTTA  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTTA  222

Query  104  TTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCTG  177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCTG  296

Query  178  GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACAA  251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACAA  370

Query  252  TGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGC  325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGC  444

Query  326  CGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCATG  399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCATG  518

Query  400  GTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGAG  473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGAG  592

Query  474  CCAGGACACAAAGACGACCAAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA  547
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA  666

Query  548  AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCACA  621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCACA  740

Query  622  GGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTCA  695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTCA  814

Query  696  GGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCA  769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCA  888

Query  770  AATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGAC  843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGAC  962

Query  844  TCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGGA  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGGA  1036

Query  918  CTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCA  991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCA  1110

Query  992  ACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTC  1065
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTC  1184

Query 1066  CCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATAGG  1139
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1185  CCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATGGG  1258

Query 1140  CCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTGG  1213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTGG  1332

Query 1214  GGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGT  1287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGT  1406

Query 1288  TTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTACC  1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTACC  1480

Query 1362  TGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTTTCTGAGGTC----------------------  1413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1481  TGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTTTCTGAGGTCTAAGACCCTGGATGGTGCCCAC  1554

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1555  TGGAGGATATACCGCCCCACCACTGGGGCCCTCCTGCTGCTCACTGCCCTTCAGCTCTGTGACCAGGTGAGTGC  1628

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1629  TTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTATGATACATCATGGAAGCGGCTGATCT  1702

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1703  TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTG  1776

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1777  TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCT  1850

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1851  GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAG  1924

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1925  CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGT  1998

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1999  TCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCA  2072

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2073  ATACCACAATTCCTGCTGAAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACAGAAAAAAGAGCCTGGATTTA  2146

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2147  CAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTATTACTTAACTT  2220

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2221  CACTACAGATTGTCTAGAAGACCTTTCTAGGAGTTATCTGATTCTAGAAGGGTCTATACTTGTCCTTGTCTTTA  2294

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2295  AGCTATTTGACAACTCTACGTGTTGTAGAAAACTGATAATAATACAAATGATTGTTGTCCATGGAAAGGCAAAT  2368

Query 1414  -----------------  1413
                             
Sbjct 2369  AAATTTTCTACAGTGAA  2385

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