Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12306
Subject:
NM_001353705.2
Aligned Length:
1512
Identities:
1415
Gaps:
93

Alignment

Query    1  ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGGGCTCGGCAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGGGCTCGGCAG  74

Query   75  CAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGG  148

Query  149  ACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTCAAGCCCCTCTTC  222
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTCAAGCCCCTCTTC  222

Query  223  GAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCCTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCCTT  296

Query  297  CCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGCCCGGGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGCCCGGGA  370

Query  371  TGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTGCCTGCGCCAGCCCCCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct  371  TGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAG--------------------------  418

Query  445  TCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTGCGCCGCCTTTTCGAGGC  518
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  ----ATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTGCGCCGCCTTTTCGAGGC  488

Query  519  CTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGGGTGCGCCTTTGTGAAGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  489  CTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGGGTGCGCCTTTGTGAAGT  562

Query  593  ACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCATGCCGGGAGCCTCGTCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  563  ACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCATGCCGGGAGCCTCGTCC  636

Query  667  AGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  637  AGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGAT  710

Query  741  GGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGCACTGATGCAGCAGCAAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct  711  GGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGCA---ATGCAGCAGCAAG  781

Query  815  CGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCCCAGATGCAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  782  CGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCCCAGATGCAG  855

Query  889  CAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAGCACCCCTCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  856  CAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAGCACCCCTCC  929

Query  963  GGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCCTCCCCCCAC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  930  GGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCCTCCCCCCAC  1003

Query 1037  AGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1004  AGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACC  1077

Query 1111  GCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGCAGCTGCCTACCCTGCTGCCTATGG  1184
            |||||||||||||||||||||||||||||||||||||||||||||||||...||||||||||||||||||||||
Sbjct 1078  GCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGGTCCTGCCTACCCTGCTGCCTATGG  1151

Query 1185  TCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAAGGGCCCGAGGGCTGTA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152  TCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAAGGGCCCGAGGGCTGTA  1225

Query 1259  ACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTTC------  1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1226  ACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTTCGGTAAT  1299

Query 1327  ------------------------------------------------------GGCTTCGTGAGCTTCGACAA  1346
                                                                  ||||||||||||||||||||
Sbjct 1300  GTCATCTCCTCGAAAGTGTTTGTGGATCGGGCGACTAACCAAAGTAAATGCTTTGGCTTCGTGAGCTTCGACAA  1373

Query 1347  CCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGC  1420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374  CCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGC  1447

Query 1421  TGAAGCGGCCCAAAGACGCCAATCGCCCGTAC  1452
            ||||||||||||||||||||||||||||||||
Sbjct 1448  TGAAGCGGCCCAAAGACGCCAATCGCCCGTAC  1479

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