Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12351
- Subject:
- NM_001184766.1
- Aligned Length:
- 1774
- Identities:
- 227
- Gaps:
- 1547
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGAAGGCTGTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGCCATCTTAAAACTATATCAGAGAAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATTTACCACGGTGTACCAGTGAAAGTCATCTCAGCTGCCTGAAGCAGGACATTCTAAATGAAAAGACTGAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGAAGCAACACTTAAGGAAGCGGAGTTGGTAACTCATTCTGTAGAATTGCTTTTGCCACTATTTAAGGACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTGAAAAGATTAATTTTGAAAATGCGAATCTTTCTGCATTGAATTTGAAGATTTCTGAACAGAAGGAAATATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATAAAAGAATTAGACACCTTCAAAAGTGTAAAACTAGCTTTAGAACATCTTCTTAGAAAGAGAGACTACAAAC 370
Query 1 -----------------------ATGTTGCTAGAAAATCTAACTGATAATGAAAGTGAAAATACTAATCTTAAG 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAACAGGAGACAATTTATCCAGCATGTTGCTAGAAAATCTAACTGATAATGAAAGTGAAAATACTAATCTTAAG 444
Query 52 AAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGA--------------- 110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCAAATACTTT 518
Query 111 -------------------------------------------------------------------------- 110
Sbjct 519 GAAAGCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGGAAG 592
Query 111 ----------------------------AAAGAGCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATCAAGA 156
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGAGAACGATAAGTTGAAAGAATATGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATCAAGA 666
Query 157 ATGAATAAGAATGAGGCTATAGTGATGAAAGAAGCAAGTAGGCAAAAAACTGTAGCTTTAAAAAAAGGCATC-- 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 667 ATGAATAAGAATGAGGCTATAGTGATGAAAGAAGCAAGTAGGCAAAAAACTGTAGCTTT-AAAAAAGGCATCTA 739
Query 229 -------------------------------------------------------------------------- 228
Sbjct 740 AAGTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCCCAAATTAGAGATCAGGAA 813
Query 229 -------------------------------------------------------------------------- 228
Sbjct 814 GCCAAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGGAAAAGTCATTATGAGAAAATTGTGATAGAAAAAAC 887
Query 229 -------------------------------------------------------------------------- 228
Sbjct 888 CGAATTGGAAGTACAGATTGAAACAATGAAAAAGCAAATCATTAATCTTTTGGAAGATCTGAAGAAAATGGAAG 961
Query 229 -------------------------------------------------------------------------- 228
Sbjct 962 ACCATGGAAAAAATTCATGTGAAGAAATTCTTAGAAAAGTTCACTCAATTGAATATGAAAATGAAACTCTGAAT 1035
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1036 CTTGAGAATACAAAATTAAAGACTACACTTGCTGCTTTGAAGGATGAAGTTGTATCTGTTGAAAATGAACTCTC 1109
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1110 AGAATTGCAAGAAGTAGAAAAAAAACAGAAAACCCTTATTGAAATGTATAAAACTCAGGTACAAAAGTTGCAAG 1183
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1184 AAGCAGCTGAAATAGTAAAAAGCAGATGTGAAAATTTGCTACATAAAAATAACCAAATAACAAAAACCAAAAAT 1257
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1258 AAAAATGTAGAGAAGGTTGATGGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAACTGTCTTAT 1331
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1332 TCAGCTGAAGTGTGAAAACCTTCAACAAAAATTAGAACAGATGGACGCAGAAAATAAAGAGCTTGAGAAGAAGC 1405
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1406 TGGCAAACCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTG 1479
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1480 GCCAGACAACTGGAAGCTGCTTTAGAAGAAGGAAGACAAAAGGTTGCTGAAGAAATAGAGAAAATGTCATCTAG 1553
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1554 AGAGAGTGCTTTACAAATTAAAATATTAGATCTGGAAACTGAGCTTAGAAAGAAAAATGAAGAACAAAATCAAC 1627
Query 229 -------------------------------------------------------------------------- 228
Sbjct 1628 TTGTTTGCAAAATGAACAGTAAAGCACAACATCAGGAAGTGTGTTTGAAAGAAGTACAAAATAGTCTTGAGAAG 1701
Query 229 ------------------------------------------------------------------------ 228
Sbjct 1702 TCGGAAAATCAAAATGAGAGTATTAAGAATTATTTACAGTTTCTTAAAACTTCTTATGTAACAATGTTTGAA 1773
