Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12394
- Subject:
- XR_386512.3
- Aligned Length:
- 4138
- Identities:
- 330
- Gaps:
- 3766
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGCTACCCACTACCCCCTACTCCTCAAGACTGCGGTGACTCAATTAGCCAGACAGACTGCAAACATGCACTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTTGGTGGACAGGTGCATGGTGTAGAACAGAGGGTTTTCCAGCCCTGGCTCCAATGAGCAGTGACTGAGAACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGATAGGAGCCTGGTCCTCTGGGGTCCGTCCGGTCCTGCTCAGATCCGCTGTCCAGCTCTAGGGTGGCGGACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGGGAACCCGGGTCGAGTCTCCATGGTGCGCGCCTCGGGTGGAAAGCCTGGCGCAGCGGCGGCCTTAGCAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGCATACAGCCACCTGGGAGGATCGCAGGCGCCCCAGGGCCGTGACACTTCACCCGCCTCCAGCGGCCCACGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTACCGGGCCAGGCGCCCAGACCCGCCCGCCGCAGGTGGGGCAGCCAGGGCCCGCGAGTAGGTGCGTGGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATCTCACCGCGTGCGGCGCGCCAGGAGGAGGAGGAGCGGGAGCGATCCCAACTTCCGGGTAGTGCAGCCGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCGCGCCACCGGCATCTTGCTTTCTGCTCCCCCTCCCCCGTGTCCCCCTCGCCTCTCCCTCCTTGCCTTTTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCCAGCCCCACCCGCCAAAATGAACAGCTCGGACGAGGAGAAGCAGCTGCAGCTCATCACCAGCTTGAAGGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAAGCCATTGGCGAATATGAAGACCTTCGAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACAAAATTAGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAACGAGATGAAGCTGTTAAAAAACTGGAAGAGTTTCAGAAAATTTCACATATGGTTATAGAGGAGGTGAATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATGCAGAACCATCTTGAAATAGAGAAGACATGTCGAGAGAGCGCTGAAGCCTTGGCGACAAAGCTAAATAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAAATAAAACACTGAAAAGAATCAGCATGCTATACATGGCCAAACTGGGGCCAGACGTAATTACAGAGGAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACATTGATGATGATGACCCAGCCACCGACACAGATGCTGCGGCTGAGACCTGTGTGTCTGTTCAGTGTCAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCAAATCAAAGAACTTCGAGATCAAATTGTGTCTGTTCAGGAAGAAAAGAAGGTGTTAGCCATCGAGCTGGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACCTCAAGAGCAAACTCGGGGAGGTGATGGAGGAGGTAAATAAAGTTAAGCAAGAAAAAGCTGTTTTAAATTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGAAGTCCTTGAGCAGAGGAAAGTCTTAGAAAAATGCAACAGAGTGTCCATGTTGGCTGTTGAAGAGTATGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACTGCAAGTGAACCTGGAACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAAGAGATGTTCATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACAAAACAAACTGAAGAGACAAAGCCACCTTCTGCTGCAGAGCTCCCTTCCTGACCAGCAGCTTTTGAAAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTAGACGAAAACGCAAAACTTATCCAGCAGCTTGAAGAAGAGAGGATCCAGCATCAGAAAAAGGTCAAAGAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGAGGAGCGGCTGGAGAATGAAGCACTTCACAAAGAGATCCATAACCTCAGACAACAGCTGGAGCTTCTGGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACGACAAGAGGGAGCTAGAGCAGAAATACCAGAGCTCGGAGGAGAAGGCCCGGAACCTGAAGCATTCAGTGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAACTTCAGAAGCGAGTGAACCAGTCTGAGAATTCGGTACCTCCCCCGCCTCCTCCTCCTCCACCTCTCCCCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCACCTCCCAATCCAATCCGGTCCCTCATGTCTATGATCCGGAAGCGATCTCACCCCAGTGGCAATAGTGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGAAAGAAAAGACAACTCAGCCAGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GATGGACAGAATTAAGAAGGGAGTTCATCTTAGACCGGTTAACCAGACAGCCAGACCCAAGGCAAAGCCAGACT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAATCCTGGGGACACTTAACAAATCCACTAGTTCG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGAAGCTTAAAATCCCTTGGCCCTGAGAACAGTGAAACTGAGTTAGAGAGGATTTTACGTCGCAGAAAGCTGAC 2072
Query 1 ----------------------------------------------------------ATGCCAGTGTTGGGTT 16
||||||||||||||||
Sbjct 2073 GGCAGAAGCAGATAGCAGTAGTCCTACCGGGATATTAGCCACCTCAGAGTCCAAGTCCATGCCAGTGTTGGGTT 2146
Query 17 CTGTATCCAGTGTAACAAAAACAGCCTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCGTCCCCCCCA 90
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||.|||||..||||.|
Sbjct 2147 CTGTATCCAGTGTAACAAAATCAGCCTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCTA 2220
Query 91 ACACCTGAGCCAGGTGAAGGGCCCCGTAAATTGGAAGGATGCACAAGTTCCAAGGTTACGTTTCA--------- 155
||||||||||||||||||||||||||||||||||||||||||||.|.|.||||||||||.|||||
Sbjct 2221 ACACCTGAGCCAGGTGAAGGGCCCCGTAAATTGGAAGGATGCACGAATCCCAAGGTTACCTTTCAGATGCTGAG 2294
Query 156 -------------------------------------------------------------------------- 155
Sbjct 2295 AGCAGTTCCTGGAGAGTTCTAATTCCCAGCTGATGAAGACAGCTTTTGCTAGGAGATGTTAACCACCCTTCGCC 2368
Query 156 ------------------------------------------------------GCCTCCCAGTAGCATTGGAT 175
|||||||||||....|||||
Sbjct 2369 TGCAGACACACGGGGCCATGAAAACGCCCACAGTAGCCCAAGGGAGCAACAGAGGCCTCCCAGTAAAGGTGGAT 2442
Query 176 GCAGGAAAAAATACATTGACGGTGAAAAACAAGCCGAACCAGTTGTAGTTTTAGATCCTGTTTCTACACATGAA 249
.|||||.|||||...|.|.|.|||||||.|||||.||.|||||||||||.||||||||||||||.|||||.|||
Sbjct 2443 ACAGGAGAAAATGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCACACACGAA 2516
Query 250 CCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGGATGAAGGCGAAATTCAACCAGA 323
|||||||||||||||||||.||||||||||||.|||||||||..|.|||||||.|.|||.||||..||||||||
Sbjct 2517 CCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGA 2590
Query 324 AAACAAAGAAGACAGCATT--GAAAACGTGA-GAGAGACAGACAGCTCCAACTGC------------------- 375
|.||||||||||||||..| |||||| | |||||||.|||||.|||||||||
Sbjct 2591 ATACAAAGAAGACAGCGGTGGGAAAAC---AGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCT 2661
Query 376 -------------------------------------------------------------------------- 375
Sbjct 2662 GGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAACCGGCAGGAACTGTTGGACATTCC 2735
Query 376 -------------------------------------------------------------------------- 375
Sbjct 2736 TTTGTTCTGGCCACACACTTCTTTGCTGGTATCACTTTGTAAGTAGCAATCATAAGTAAGCTGTTTAGCAAAAT 2809
Query 376 -------------------------------------------------------------------------- 375
Sbjct 2810 GCATCTTCTGGGTAGTTTTTAATCTTTACAGGAGTGAGGGTTCTTTCCGGTTTCTATATGAAGTATGACTTCCC 2883
Query 376 -------------------------------------------------------------------------- 375
Sbjct 2884 TGAGGCGGTGGCGGAACTCAGAGGTTGGTGTCTTTACAGGGAACATATGTACCCCTCATCAAATTATTCACGGG 2957
Query 376 -------------------------------------------------------------------------- 375
Sbjct 2958 AAAATTCAAGGTGGTTGCTGGTAACTGTATAAACAGAGACCACCAAACTTAACAATTATCTTAAAGGCACCCTT 3031
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3032 TAATCCAAGCCCTAGGGCATGGAGAGACCAAGGCAAGAGGATCACGTGAGCCTGAGTCTTAGTTTGGATCACAC 3105
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3106 AGTACAACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGG 3179
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3180 GAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGTGCGTGAGACCTTCCGTCT 3253
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3254 CTGAGCTCAGGAGGTGGCATCATGGACTCTTAGGTCTCAATTGAACACAGTTGACTATTGTGTGGAAATCATGA 3327
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3328 CCCTGTGTCCAAGGCTTTACAGAGTCCTTCAGGGTGATGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGG 3401
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3402 ACGCTCAAACCTTGAATTTAACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 3475
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3476 CCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACA 3549
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3550 CATTGTTTTTCTCCCTTCACTGCGGATCTATACTACATGGGTCTTTTCTTGTTTTGTTTTGTTTTGTTTTGTTT 3623
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3624 TTTAGAGGAAATTAAGTGGTAGTTTCTAAGAATACAATGTTTCACACTACCACGGTGAATAAATAGAAATGTAA 3697
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3698 TCAGGGATTTAAAAAAAAAAACTTATGCAGGTTTTCAAAGTTGATTGTTTCAAAATTGGTGTTTATTTAAAATA 3771
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3772 AGTGGTAATGTACTTGAGTGCACTTTTTATGATAATGATTCAGTAATGGTAATTTTACTATTAAGGAAATGGAA 3845
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3846 AGGCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAATGATA 3919
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3920 ACAATTGCAGTAGTTGTATCCTATTGTATTTTTGCACGTGTGCTACTAGCGTGGGCCTGGGGAGGTGGGAAGGC 3993
Query 376 -------------------------------------------------------------------------- 375
Sbjct 3994 AGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGTAGGGTCAATGGGCTTGACTGTTTTCCCTGTC 4067
Query 376 -------------------------------------------------------------------- 375
Sbjct 4068 TGTCAGTGCTGATTTTATATCCCTGTCAGTTTACTCATGGGGAATTAAAACGCGATTTTTTTTTTCAA 4135
