Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12422
- Subject:
- XR_001754885.1
- Aligned Length:
- 2066
- Identities:
- 710
- Gaps:
- 1355
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTGCACGCGCGGCGCTGGCTCCAAAGTGCGTCACGGGCACCGGCCGCGCTCCTTCTGCCGCCAGGGCGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGCACCCGGCCAGCGCGGGCAGGGCCACGGGTGCCCGGCTGTTTCCCGGGTGTGGAAGGCGCTCAAGGTGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCCGGGGCGCGCTACTGGGGGCGCCCTCCGCGGTGGGCAGCGCGCCAGGGATCGGCCTGGGCAGCCGCGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCGCGAAGGCTGCGCTTTCCCTACGGCCCCCCTCGCTTCCTCCGGCACGGCGGCAACGGAGATTTCCTCTCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAAACTACGCGGATCCTTTTCGGGGATCCTCGCCCCGCCCCAGTTCTCCGCCCCCTCCCCTTTGCTGGGGCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGCTGGCCCGCGCAGGGGAGGAGGCTCTGGCAGCCTGGGCAGGGAGGCGGCGGGGGGCCGCGGAGCCGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCATCGATTCTCCCCGCCATGTGACGCCGTCCTTAGCCCTGCGACCCCCAGCGCGTCCCGGGCCTGCGCCTCC 518
Query 1 --------------------ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCAT 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCCCGCCGCGCAGCGCACGATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCAT 592
Query 55 CACGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTC 128
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTC 666
Query 129 CAAAGAGATCTCAGCGCTCACCGACTTCTCTGGTTACCTAACCAAACTCCTGCAAAACCACACCACCTATGCCT 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAAAGAGATCTCAGCGCTCACCGACTTCTCTGGTTACCTAACCAAACTCCTGCAAAACCACACCACCTATGCCT 740
Query 203 GTGATGGGGACTATTTGAATCTACAGTGCCCTCGGCATTCTACGATAAGTGTCCAATCGGCATTTTATGGGCAA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGATGGGGACTATTTGAATCTACAGTGCCCTCGGCATTCTACGATAAGTGTCCAATCGGCATTTTATGGGCAA 814
Query 277 GATTACCAAATGTGTAGTTCCCAGAAGCCTGCCTCCCAGAGGGAAGACAGCTTAACCTGTGTGGCAGCCACCAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GATTACCAAATGTGTAGTTCCCAGAAGCCTGCCTCCCAGAGGGAAGACAGCTTAACCTGTGTGGCAGCCACCAC 888
Query 351 CTTCCAGAAGGTGCTGGACGAATGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGTGTTTTTGGAC 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTCCAGAAGGTGCTGGACGAATGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGTGTTTTTGGAC 962
Query 425 CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGGTCTCCTTTAAATGCCAACCTAATGAATTAAAAAACAAA 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGGTCTCCTTTAAATGCCAACCTAATGAATTAAAAAACAAA 1036
Query 499 ACCGTGTGTGAAGACCAGGAGCTGAAACTGCACTGCCATGAATCCAAGTTCCTCAACATCTACTCTGCGACCTA 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCGTGTGTGAAGACCAGGAGCTGAAACTGCACTGCCATGAATCCAAGTTCCTCAACATCTACTCTGCGACCTA 1110
Query 573 CGGCAGGAGGACCCAGGAAAGGGACATCTGCTCCTCCAAGGCAGAGCGGCTCCCCCCTTTC------------- 633
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGGCAGGAGGACCCAGGAAAGGGACATCTGCTCCTCCAAGGCAGAGCGGCTCCCCCCTTTCGAGAGAACAGACC 1184
Query 634 -------------------------------------------------------------------------- 633
Sbjct 1185 CAGCTGTGAAACAGCCCAAGGACCTGCGCTTATTGATCAAAATCTAAAATGAGCTCCTTAATATGTTAAATTGC 1258
Query 634 -------------------------------------------------------------------------- 633
Sbjct 1259 TACAATGTATGTGTGGATCGCAGGTGAAATTCAACATTAATTTAAAAAAGAAATGCATGCCTAAGTAATACCTT 1332
Query 634 -----------------------------------------------------GATTGCTTGTCTTACTCAGCT 654
|||||||||||||||||||||
Sbjct 1333 GGACCTGAAAAAAAGAAAATGAACAAAAAGTGAGCTAAGCGCACTTTAACTCAGATTGCTTGTCTTACTCAGCT 1406
Query 655 TTGCAAGTCCTATCCCGAAGGTGCTATGGGAAGCAGAGATGCAAAATCATCGTCAACAATCACCATTTTGGAAG 728
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTGCAAGTCCTATCCCGAAGGTGCTATGGGAAGCAGAGATGCAAAATCATCGTCAAC----------------- 1463
Query 729 CCCCTGTTTGCCAGGCGTGAAAAAATACCTCACTGTGACCTACGCATGTGTTCCCAAGAACATACTCACAGCGA 802
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 803 TTGATCCAGCCATTGCTAATCTAAAACCTTCTTTGAAGCAGAAAGATGGTATAAACTTCGACCCAAGCGGATCG 876
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 877 AAGGTTCTGAGGAAAGATGGAATTCTTGTTAGCAACTCTCTGGCAGCCTTTGCTTACATTAGAGCCCACCCGGA 950
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 951 GAGAGCTGCCCTGCTGTTCGTGTCCAGTGTCTGCATCGGCCTGGCCCTCACACTGTGCGCCCTGGTCATCAGAG 1024
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 1025 AGTCCTGTGCCAAGGACTTCCGCGACTTGCAGCTGGGGAGGGAGCAGCTGGTGCCAGGAAGTGACAAGGTCGAG 1098
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 1099 GAGGACAGCGAGGATGAAGAAGAGGAGGAGGACCCCTCTGAGTCTGATTTCCCAGGGGAACTGTCGGGGTTCTG 1172
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 1173 TAGGACTTCATATCCTATATACAGTTCCATAGAAGCTGCAGAGCTCGCAGAAAGGATTGAGCGCAGGGAGCAAA 1246
Sbjct 1464 -------------------------------------------------------------------------- 1463
Query 1247 TCATTCAGGAAATATGGATGAACAGTGGTTTGGACACCTCGCTCCCAAGAAACATGGGCCAGTTCTAC 1314
Sbjct 1464 -------------------------------------------------------------------- 1463
