Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12511
- Subject:
- NM_028343.4
- Aligned Length:
- 1388
- Identities:
- 411
- Gaps:
- 922
Alignment
Query 1 ATGGCGGCCCTCAGCAAGTCCATCCCTCATAACTGCTATGAGATCGGCCACACTTGGCACCCTTCCTGCCGGGT 74
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||||.||||
Sbjct 1 ATGGCGGCCCTCAGCAAGTCCATCCCTCATAACTGCTACGAGATCGGCCACACTTGGCACCCCTCCTGCAGGGT 74
Query 75 CTCCTTCCTGCAGATCACCGGGGGCGCCCTGGAGGAGTCCCTGAAGATCTATGCTCCTCTGTACTTGATTGCAG 148
||||||||||||||||||..||||||||||||||||||||||.|.||||||.||.||.||||||.|||||||||
Sbjct 75 CTCCTTCCTGCAGATCACTTGGGGCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCCTGTACCTGATTGCAG 148
Query 149 CAATTCTCCGGAAACGGAAATTAGACTATTATTTACACAAACTACTCCCTGAGATCCTACAATCCGCTTCATTT 222
|..||||||||||.||.||..|.||.|||||..|..|||||||.||.|||||||||||.||.|||||.||.||.
Sbjct 149 CTGTTCTCCGGAAGCGCAAGCTGGAGTATTACCTGTACAAACTGCTTCCTGAGATCCTCCAGTCCGCCTCCTTC 222
Query 223 CTAACTGCTAATGGGGCCTTGTATATGGCTTTCTTTTGCATTTTAAGGAAGATACTTGGAAAATTCTACTCATG 296
||.||||||||||||||||||||.||..|||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 223 CTGACTGCTAATGGGGCCTTGTACATTACTTTCTTCTGCATTTTAAGGAAGATCCTTGGAAAATTCTACTCATG 296
Query 297 GACTCCTGGCTTTGGTGCCGCTCTGCCAGCATCTTATGTGGCCATTCTCATTGAAAGAAAAAGCAGGAGAGGGC 370
||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 297 GACTCCTGGCTTTGGTGCTGCTCTGCCAGCCTCATATGTGGCCATTCTAATTGAAAGAAAAAGCAGGAGAGGGC 370
Query 371 TGCTCACAATTTATATGGCCAACTTG---------------------ATGGAGTCTCACTGTCTTCC------- 416
|||||||||||||||||||||||||| |||| ||.||.|
Sbjct 371 TGCTCACAATTTATATGGCCAACTTGGCCACAGAAACACTATTTAGAATGG---------GTGTTGCAAGAGGA 435
Query 417 -CCA----GGC---------TGGAG---------TGATTTCAGC-TCCCTGCAGCC----------TCTGCCTC 456
||| |.| ||||| || |||.|| ||.|.||.||| ||| .|.
Sbjct 436 ACCATCACGACGTTAAGAAATGGAGAAGTCCTTTTG--TTCTGCATCACAGCGGCCATGTACATGTTCT--TTT 505
Query 457 CCAGGTTCAAGGGAT------------------TCTCCTGCC-------------------------------- 480
.|||||.||| .||| |.|.||||.
Sbjct 506 TCAGGTGCAA-AGATGGCTTAAAAGGCTTTACATTTTCTGCACTTAGGTTTATCGTGGGGAAGGAAGAAATTCC 578
Query 481 -------------------------------------------------------------------------- 480
Sbjct 579 CACGCACTCTTACTCACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGA 652
Query 481 -------------------------------------------------------------------------- 480
Sbjct 653 GAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGC 726
Query 481 -------------------------------------------------------------------------- 480
Sbjct 727 TGCAAGCATTATGAAGACAACTGCATTTCCTACTGCATTAAAGGCTTCATCAGAATGTTCAGCGTGGGCTACTT 800
Query 481 -------------------------------------------------------------------------- 480
Sbjct 801 GATCCAGTGCTGTCTCCGGATCCCCTCTGCGTTTAGGCATCTGTTTACAGAACCATCCCGGCTCCTCTCTCTTT 874
Query 481 -------------------------------------------------------------------------- 480
Sbjct 875 TCTACAACAAGGAGAACTTCCAGCTGGGGGCTTTCCTTGGATCTTTTGTTAGTATATACAAGGGCACAAGTTGT 948
Query 481 -------------------------------------------------------------------------- 480
Sbjct 949 TTCCTGCGCTGGATCAGGAATCTGGATGACGAGCTGCATGCTATTGTGGCTGGGTTTTTGGCAGGTGTGTCGAT 1022
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1023 GATGTTTTATAAAAGCACAACAATTTCCATGTACCTAGCTTCCAAGCTGGTGGAGACAATGTATTTCAAGGGCA 1096
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1097 TCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTC 1170
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1171 CACGCAGCTGTTATGGAAGTTCAGAACTTGCGACCATCTTACTGGAAGTTCCTTTTAAGGCTCACCAAGGGCAG 1244
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1245 GTTTGCACTCATGAACCGAAAAGCCCTGGATGTGTTTGGTACTGGCGCATCTAGAGAGTTTCACAACTTCATCC 1318
Query 481 -------------------------------------------------------- 480
Sbjct 1319 CCAGACTAGACCCACGGTACACAGTTGTCACACCGGAGCTGCCCATAGACTTTTCC 1374