Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12570
- Subject:
- XM_006525950.2
- Aligned Length:
- 3231
- Identities:
- 1811
- Gaps:
- 1176
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGCCTTTACGGAAAAGCGTTTGAGGATTCCACAAGCATCGGGTCTTAATGTGGAAATGAGTTCCCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAGCAGTGGTTCCGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTACCAGGGAGCACGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCCTATCCACAGGTACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCCAGCACACCTGACAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGCCTAGCCGTCCCATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTTACCATGGAGAGCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAGTAACCTGCATCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTCACATTGGAGCTTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTCCTGAGGCCAACTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAATCCAGTCTCGGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAGCGCAGTCTCCTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATCCAGCATCCACCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACTACCTTCTCATCCTG 1036
Query 1 --------------------------------ATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCT 42
||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct 1037 CGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTGGCACACCAGTGGCT 1110
Query 43 GCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTCACACAC 116
|||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||||||||||.|||||
Sbjct 1111 GCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGATCTGTGTCGCACAC 1184
Query 117 GCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCT 190
.|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||||||||||||||.|
Sbjct 1185 ACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTACTGCTGTGACCACTT 1258
Query 191 CAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCT 264
||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||||||.||.||||||
Sbjct 1259 CAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCCAGCCTGATTACCCT 1332
Query 265 GCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAG 338
.|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.|||||||||||||||||||.
Sbjct 1333 CCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCCATGGAAACCCGAAA 1406
Query 339 TGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTCTGCATACCCACTGG 412
||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.|||||.|||||.||||
Sbjct 1407 TGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTCTGCCTACCCGCTGG 1480
Query 413 CGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTTCAGCTCAGGCTCCA 486
|.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.||||||||.|||||.||.|||
Sbjct 1481 CTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTTCTGCTCAAGCCCCA 1554
Query 487 AACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCAGTTGATGAC 560
|||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||||||||.|||||||
Sbjct 1555 AACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCCATGCAGCTGATGAC 1628
Query 561 AGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGG 634
|||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.|||||.||||||||.|
Sbjct 1629 AGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACAGGGAATCCAGCCAG 1702
Query 635 CCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAAC 708
|||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||||.|||||||||||
Sbjct 1703 CCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAGCAGCCCCAATCAAC 1776
Query 709 ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACTTCAGCAGTGGTGTT 782
||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.| ||||||||||
Sbjct 1777 ACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACCT---CAGTGGTGTT 1847
Query 783 GGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGG 856
||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||||
Sbjct 1848 GGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGCGGCAACCACAGTGG 1921
Query 857 TGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGG 930
|.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.|||||.||||||||.|||
Sbjct 1922 TCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGCCCAGCATACTGCGG 1995
Query 931 AAGAAACCTGCCACAGAT-------------------------------------------------------- 948
||||||||||||||||||
Sbjct 1996 AAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTCCTCAGCCTCCTGACGTGGCTACTCC 2069
Query 949 -------------------------------------------------GGTGCCAAACCCAAGTCTGAAATCC 973
|||||||||||.||.||.|||.|.|
Sbjct 2070 TCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCAGGTGCCAAACCTAAATCCGAAGTGC 2143
Query 974 ACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATT 1047
|.||||||||.||||||||.||.||.||||||.|||||||..||||||||||||||...||.|||||||||.||
Sbjct 2144 ATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAATCAAAATGCCGAACAGCCTACCGTT 2217
Query 1048 GCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCGTCACA 1121
||.||||||||.||||||||||||||.||||||||||||||.|..||||||||.|||||||||||.||.||.||
Sbjct 2218 GCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGATTGCGGCAGCCAGTCCTCCATCCCA 2291
Query 1122 ACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCACCATTGCAGCTGCAC 1195
|||||||.||||||||||.||||||||.|||||.||.||..|||||||||||||||||||||||||.||..|||
Sbjct 2292 ACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCACCCATCACCACCATTGCTGCCACAC 2365
Query 1196 CACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTGAAATTAAAGTGAAA 1269
||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.|||||.||||||||.||.||||||||.
Sbjct 2366 CAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCCTCCTGTTCCTGAGATCAAAGTGAAG 2439
Query 1270 GAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACCAACACTGTGTCTCC 1343
|||||||..||.|||.||||.||||..|||||.||.||..||||.|||||.|||||.||||||||.||||||||
Sbjct 2440 GAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTCCTCTGGCCACCAACACGGTGTCTCC 2513
Query 1344 ATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAGGAAAA 1417
|||||||||.||||||||||.||||.|||||||||||.||||||||||.|||||||||||||||||||||||||
Sbjct 2514 ATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTCCCACCTGGTGCCTCCCCAAGGAAAA 2587
Query 1418 AGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAG 1491
|||||||||||||.|||||.||||||||.|||||.||.||.||.|||||||||||||||||||||||.||||||
Sbjct 2588 AGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGATGGAGACAAACAGCACTGACGATGAG 2661
Query 1492 AAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGA 1565
||||||.|||||||||||||.|||||.|||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 2662 AAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTCCTCCCAAAGAGTACATTGATGAGGA 2735
Query 1566 AGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCGGAACCCCTGGAAAG 1639
|||||||||.||||||||||||||.||.|||||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 2736 AGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTACGTCACTATCGGAACCCCTGGAAAG 2809
Query 1640 CTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTGCAGGAAATA 1713
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2810 CTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTACAGGAAATA 2883
Query 1714 GCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCCCAGTTACTACAGCT 1787
|||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 2884 GCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACCTCTGTGCTGCCCAGTTACTACAGCT 2957
Query 1788 GACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCCAAAGAAAAAAGCAG 1861
|||.|||||||||||.||.||.|||||||||||.||.|||||.||||||||||||||||||||||||||.||||
Sbjct 2958 GACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAAGGGATTATCCCAAAGAAAAAGGCAG 3031
Query 1862 CAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTAAACTTGTGATGGAT 1935
|.||.|||||.|||||.||.||||||||.||.||||||||||||||.||||||.||||||||||.||||||||.
Sbjct 3032 CGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACATGCAGCGGTGTAAACTAGTGATGGAC 3105
Query 1936 CAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTGAAGCTGCTTAACAA 2009
|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|||||.||.|||||||||||.|||||
Sbjct 3106 CAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGGACCGGGTGCTGAAGCTGCTCAACAA 3179
Query 2010 GAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC 2058
|||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3180 GAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG 3228
